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Record Information
Version1.0
Created at2022-09-12 16:56:41 UTC
Updated at2022-09-12 16:56:41 UTC
NP-MRD IDNP0331018
Secondary Accession NumbersNone
Natural Product Identification
Common Name3-[(3s,3ar,5ar,6s,7s,9ar,9br)-3-[(2s,5s)-2-hydroxy-6-methyl-5-{[(2s,3r,4s,5s)-3,4,5-trihydroxyoxan-2-yl]oxy}hept-6-en-2-yl]-6,9a,9b-trimethyl-7-(prop-1-en-2-yl)-1h,2h,3h,3ah,5ah,7h,8h,9h-cyclopenta[a]naphthalen-6-yl]propanoic acid
Description3-[(3S,3aR,5aR,6S,7S,9aR,9bR)-3-[(2S,5S)-2-hydroxy-6-methyl-5-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}hept-6-en-2-yl]-6,9a,9b-trimethyl-7-(prop-1-en-2-yl)-1H,2H,3H,3aH,5aH,6H,7H,8H,9H,9aH,9bH-cyclopenta[a]naphthalen-6-yl]propanoic acid belongs to the class of organic compounds known as sesterterpenoids. These are terpenes composed of five consecutive isoprene units. 3-[(3s,3ar,5ar,6s,7s,9ar,9br)-3-[(2s,5s)-2-hydroxy-6-methyl-5-{[(2s,3r,4s,5s)-3,4,5-trihydroxyoxan-2-yl]oxy}hept-6-en-2-yl]-6,9a,9b-trimethyl-7-(prop-1-en-2-yl)-1h,2h,3h,3ah,5ah,7h,8h,9h-cyclopenta[a]naphthalen-6-yl]propanoic acid is found in Cyclocarya paliurus. It was first documented in 2022 (PMID: 36130844). Based on a literature review a significant number of articles have been published on 3-[(3S,3aR,5aR,6S,7S,9aR,9bR)-3-[(2S,5S)-2-hydroxy-6-methyl-5-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}hept-6-en-2-yl]-6,9a,9b-trimethyl-7-(prop-1-en-2-yl)-1H,2H,3H,3aH,5aH,6H,7H,8H,9H,9aH,9bH-cyclopenta[a]naphthalen-6-yl]propanoic acid (PMID: 36130843) (PMID: 36130842) (PMID: 36130841) (PMID: 36130840) (PMID: 36130836) (PMID: 36130839).
Structure
Thumb
Synonyms
ValueSource
3-[(3S,3AR,5ar,6S,7S,9ar,9BR)-3-[(2S,5S)-2-hydroxy-6-methyl-5-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}hept-6-en-2-yl]-6,9a,9b-trimethyl-7-(prop-1-en-2-yl)-1H,2H,3H,3ah,5ah,6H,7H,8H,9H,9ah,9BH-cyclopenta[a]naphthalen-6-yl]propanoateGenerator
Chemical FormulaC35H56O8
Average Mass604.8250 Da
Monoisotopic Mass604.39752 Da
IUPAC Name3-[(3S,3aR,5aR,6S,7S,9aR,9bR)-3-[(2S,5S)-2-hydroxy-6-methyl-5-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}hept-6-en-2-yl]-6,9a,9b-trimethyl-7-(prop-1-en-2-yl)-1H,2H,3H,3aH,5aH,6H,7H,8H,9H,9aH,9bH-cyclopenta[a]naphthalen-6-yl]propanoic acid
Traditional Name3-[(3S,3aR,5aR,6S,7S,9aR,9bR)-3-[(2S,5S)-2-hydroxy-6-methyl-5-{[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy}hept-6-en-2-yl]-6,9a,9b-trimethyl-7-(prop-1-en-2-yl)-1H,2H,3H,3aH,5aH,7H,8H,9H-cyclopenta[a]naphthalen-6-yl]propanoic acid
CAS Registry NumberNot Available
SMILES
CC(=C)[C@H](CC[C@](C)(O)[C@H]1CC[C@]2(C)[C@@H]1C=C[C@@H]1[C@@](C)(CCC(O)=O)[C@@H](CC[C@@]21C)C(C)=C)O[C@@H]1OC[C@H](O)[C@H](O)[C@H]1O
InChI Identifier
InChI=1S/C35H56O8/c1-20(2)22-11-17-34(7)27(32(22,5)15-14-28(37)38)10-9-23-24(12-16-33(23,34)6)35(8,41)18-13-26(21(3)4)43-31-30(40)29(39)25(36)19-42-31/h9-10,22-27,29-31,36,39-41H,1,3,11-19H2,2,4-8H3,(H,37,38)/t22-,23+,24-,25-,26-,27+,29-,30+,31-,32-,33+,34+,35-/m0/s1
InChI KeyGZBFVWFZMJMQQN-VHMNRUQPSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Cyclocarya paliurusLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sesterterpenoids. These are terpenes composed of five consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesterterpenoids
Direct ParentSesterterpenoids
Alternative Parents
Substituents
  • Sesterterpenoid
  • Glycosyl compound
  • O-glycosyl compound
  • Carbocyclic fatty acid
  • Hydroxy fatty acid
  • Monosaccharide
  • Fatty acyl
  • Oxane
  • Tertiary alcohol
  • Secondary alcohol
  • Acetal
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Oxacycle
  • Organoheterocyclic compound
  • Polyol
  • Organic oxide
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Carbonyl group
  • Alcohol
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.34ChemAxon
pKa (Strongest Acidic)4.94ChemAxon
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area136.68 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity165.51 m³·mol⁻¹ChemAxon
Polarizability67.62 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound162960264
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Cani I, Righini M, Cenni P, Foschi M: Teaching NeuroImage: Partially Reversible Widespread Leukoencephalopathy Associated With Atypical Hemolytic Uremic Syndrome. Neurology. 2022 Sep 21. pii: WNL.0000000000201378. doi: 10.1212/WNL.0000000000201378. [PubMed:36130844 ]
  2. Sasaki R, Morimoto S, Ozawa F, Okano H, Yoshida M, Ishiura H, Tsuji S, Kuzuhara S, Kokubo Y: APOE Alleles With Tau and Abeta Pathology In Patients With Amyotrophic Lateral Sclerosis and Parkinsonism-Dementia Complex in the Kii Peninsula. Neurology. 2022 Sep 21. pii: WNL.0000000000201156. doi: 10.1212/WNL.0000000000201156. [PubMed:36130843 ]
  3. Zhang Z, Wang M, Gill D, Liu X: Genetically Predicted Smoking and Alcohol Consumption and Functional Outcome After Ischemic Stroke. Neurology. 2022 Sep 21. pii: WNL.0000000000201291. doi: 10.1212/WNL.0000000000201291. [PubMed:36130842 ]
  4. Khamis S, Mitakidou MR, Champion M, Goyal S, Jones RL, Siddiqui A, Sabanathan S, Hedderly T, Lin JP, Jungbluth H, Papandreou A: Clinical Reasoning: A Teenage Girl With Progressive Hyperkinetic Movements, Seizures, and Encephalopathy. Neurology. 2022 Sep 21. pii: WNL.0000000000201385. doi: 10.1212/WNL.0000000000201385. [PubMed:36130841 ]
  5. Rosenberg A, Ohlund-Wistbacka U, Hall A, Bonnard A, Hagman G, Ryden M, Thunborg C, Wiggenraad F, Sandebring-Matton A, Solomon A, Kivipelto M: beta-Amyloid, Tau, Neurodegeneration Classification and Eligibility for Anti-amyloid Treatment in a Memory Clinic Population. Neurology. 2022 Sep 21. pii: WNL.0000000000201043. doi: 10.1212/WNL.0000000000201043. [PubMed:36130840 ]
  6. Yu H, Cai G, Wu J, Li Q: Clinical Phenotypic Variability and Significance of Pneumolabyrinth After Tympanum-Penetrating Injury. Ear Nose Throat J. 2022 Sep 21:1455613221128132. doi: 10.1177/01455613221128132. [PubMed:36130836 ]
  7. Silverman A, Beres S: Child Neurology: Horner Syndrome in an Otherwise Well-Appearing Infant. Neurology. 2022 Sep 21. pii: WNL.0000000000201377. doi: 10.1212/WNL.0000000000201377. [PubMed:36130839 ]
  8. Harada Y, Wang SH, Juel VC: Clinical Reasoning: A 36-Year-Old Man With Asymmetric Muscle Weakness. Neurology. 2022 Sep 21. pii: WNL.0000000000201379. doi: 10.1212/WNL.0000000000201379. [PubMed:36130838 ]
  9. Guest O, Memon AA, Chukweubuka A, Zaheer M, Siddiqi N: Robotic low anterior resection for locally advanced rectal cancer - A video vignette. Colorectal Dis. 2022 Sep 21. doi: 10.1111/codi.16345. [PubMed:36130837 ]
  10. Pellicori P, Kalra PR, Clark AL, Friday JM, Cleland JGF: Chronic kidney disease (CKD) and CKD-ism in heart failure - what a mess! Eur J Heart Fail. 2022 Sep 21. doi: 10.1002/ejhf.2696. [PubMed:36130835 ]
  11. LOTUS database [Link]