NP-MRD: Showing NP-Card for 2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone (NP0331003)

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Record Information

Version

1.0

Created at

2022-09-12 16:54:38 UTC

Updated at

2022-09-12 16:54:38 UTC

NP-MRD ID

NP0331003

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone

Description

Splendoline belongs to the class of organic compounds known as strychnos alkaloids. These are alkaloids having a core structure based on the strychnan, stemmadenine (seco-curan), or the akuammicine (curan) skeleton. 2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone is found in Strychnos henningsii. Based on a literature review very few articles have been published on Splendoline.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309122218542D          

 27 32  0  0  1  0            999 V2000
   -0.2049   -1.1818    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6015   -1.0074    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8008   -0.1696    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6075    0.0201    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1633   -0.6095    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0018   -0.6852    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4945   -0.0315    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.2866    0.7669    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4913    0.9861    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8741    1.3461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6663    2.1445    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2489   -0.3643    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9801    0.0177    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6765   -0.4246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6417   -1.2489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9104   -1.6309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2140   -1.1886    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4425   -1.4815    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8041   -2.3106    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2722   -3.0060    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4486   -2.7223    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4767   -2.5901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1559   -1.7227    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8423   -1.3505    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3869   -1.9949    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9144   -1.9965    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5537   -2.5180    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  5  4  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
  7 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 12 17  1  0  0  0  0
 18 17  1  6  0  0  0
  6 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 23 22  1  1  0  0  0
  2 23  1  0  0  0  0
 23 24  1  0  0  0  0
  5 24  1  0  0  0  0
 24 25  1  1  0  0  0
 25 26  1  0  0  0  0
 21 26  1  0  0  0  0
 18 26  1  0  0  0  0
 26 27  1  6  0  0  0
M  END

     RDKit          3D

 53 58  0  0  0  0  0  0  0  0999 V2000
   -4.5337    0.3118    0.6649 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3274    1.1988    0.6923 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5215    0.7574    1.7262 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3934    1.5187    1.9333 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4460    1.3411    0.7450 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2856    0.0627    0.7776 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7206    0.2051    1.0445 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.3303    1.1270    1.9369 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6002    1.9279    2.6345 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7770    1.2944    2.1795 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9730    2.4075    3.0596 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4326   -0.7477    0.2645 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7698   -1.1223    0.2294 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2514   -2.1164   -0.6346 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3799   -2.7478   -1.4793 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0573   -2.3690   -1.4365 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5575   -1.3860   -0.5883 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1905   -0.8229   -0.3858 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7112   -2.0175   -0.1972 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4675   -2.1155   -1.4880 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5988   -0.7264   -1.8618 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7365   -0.0748   -1.3881 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5765    1.2080   -0.6432 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1870    1.7039   -0.5003 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3240    1.2741   -1.6782 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3239   -0.2036   -1.6599 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5169   -0.6427   -2.7070 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2882    0.7153    1.3744 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0325    0.2620   -0.3200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3087   -0.7203    1.0652 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6640    2.2186    0.9762 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6365    2.5683    2.0878 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9132    1.0945    2.8452 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3079    2.1700    0.8969 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0839   -0.5008    1.6915 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3657    1.5785    1.2904 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2068    0.4578    2.7717 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3502    3.1348    2.8091 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5080   -0.6784    0.8580 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2944   -2.3970   -0.6506 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7362   -3.5239   -2.1586 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3928   -2.8816   -2.1123 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4460   -1.8936    0.6094 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1470   -2.9444    0.0416 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9477   -2.6869   -2.2850 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5045   -2.5430   -1.3191 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2727   -0.7862   -0.6891 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4624   -0.0074   -2.2561 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1351    1.9668   -1.2398 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1797    2.8375   -0.5634 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6681    1.7504   -1.6225 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8160    1.6130   -2.6097 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3129   -0.0497   -2.7312 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
  7 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  1
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  6
 23  2  1  0
 24  5  1  0
 18  6  1  0
 26 18  1  0
 17 12  1  0
 26 21  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  2 31  1  1
  4 32  1  0
  4 33  1  0
  5 34  1  1
  6 35  1  1
 10 36  1  0
 10 37  1  0
 11 38  1  0
 13 39  1  0
 14 40  1  0
 15 41  1  0
 16 42  1  0
 19 43  1  0
 19 44  1  0
 20 45  1  0
 20 46  1  0
 22 47  1  0
 22 48  1  0
 23 49  1  6
 24 50  1  6
 25 51  1  0
 25 52  1  0
 27 53  1  0
M  END


  Mrv1652309122218542D          

 27 32  0  0  1  0            999 V2000
   -0.2049   -1.1818    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6015   -1.0074    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8008   -0.1696    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6075    0.0201    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1633   -0.6095    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0018   -0.6852    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4945   -0.0315    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.2866    0.7669    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4913    0.9861    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8741    1.3461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6663    2.1445    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2489   -0.3643    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9801    0.0177    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6765   -0.4246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6417   -1.2489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9104   -1.6309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2140   -1.1886    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4425   -1.4815    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8041   -2.3106    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2722   -3.0060    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4486   -2.7223    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4767   -2.5901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1559   -1.7227    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8423   -1.3505    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3869   -1.9949    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9144   -1.9965    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5537   -2.5180    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  5  4  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
  7 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 12 17  1  0  0  0  0
 18 17  1  6  0  0  0
  6 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 23 22  1  1  0  0  0
  2 23  1  0  0  0  0
 23 24  1  0  0  0  0
  5 24  1  0  0  0  0
 24 25  1  1  0  0  0
 25 26  1  0  0  0  0
 21 26  1  0  0  0  0
 18 26  1  0  0  0  0
 26 27  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0331003

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1OC[C@H]2[C@@H]3N(C(=O)CO)C4=CC=CC=C4[C@@]33CCN4C[C@@H]1[C@@H]2C[C@@]34O

> <INCHI_IDENTIFIER>
InChI=1S/C21H26N2O4/c1-12-14-9-22-7-6-20-16-4-2-3-5-17(16)23(18(25)10-24)19(20)15(11-27-12)13(14)8-21(20,22)26/h2-5,12-15,19,24,26H,6-11H2,1H3/t12-,13+,14+,15-,19+,20+,21-/m1/s1

> <INCHI_KEY>
PUJOYKKZYBTUSK-LQOCACJHSA-N

> <FORMULA>
C21H26N2O4

> <MOLECULAR_WEIGHT>
370.449

> <EXACT_MASS>
370.189257325

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
53

> <JCHEM_AVERAGE_POLARIZABILITY>
39.399336684403366

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-hydroxy-1-[(4S,12S,13R,16R,17S,18R,20R)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0^{4,12}.0^{4,20}.0^{5,10}.0^{13,18}]henicosa-5,7,9-trien-11-yl]ethan-1-one

> <JCHEM_LOGP>
-0.12193966900000067

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
13.584177541304943

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.60798400660748

> <JCHEM_PKA_STRONGEST_BASIC>
8.910531779008389

> <JCHEM_POLAR_SURFACE_AREA>
73.24

> <JCHEM_REFRACTIVITY>
99.07709999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
2-hydroxy-1-[(4S,12S,13R,16R,17S,18R,20R)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0^{4,12}.0^{4,20}.0^{5,10}.0^{13,18}]henicosa-5,7,9-trien-11-yl]ethanone

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0      -0.382  -2.206   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.123  -1.881   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       1.495  -0.317   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0       3.001   0.038   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.038  -1.138   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.603  -1.279   0.000  0.00  0.00           C+0
HETATM    7  N   UNK     0       6.523  -0.059   0.000  0.00  0.00           N+0
HETATM    8  C   UNK     0       6.135   1.432   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       4.650   1.841   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       7.232   2.513   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       6.844   4.003   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       7.931  -0.680   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       9.296   0.033   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      10.596  -0.793   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.531  -2.331   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       9.166  -3.044   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.866  -2.219   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.426  -2.766   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       7.101  -4.313   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       6.108  -5.611   0.000  0.00  0.00           C+0
HETATM   21  N   UNK     0       4.571  -5.082   0.000  0.00  0.00           N+0
HETATM   22  C   UNK     0       2.756  -4.835   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.158  -3.216   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.439  -2.521   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       4.455  -3.724   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       5.440  -3.727   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       6.634  -4.700   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   23                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   24                                                  
CONECT    6    5    7   18                                                  
CONECT    7    6    8   12                                                  
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10                                                            
CONECT   12    7   13   17                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   12   18                                                  
CONECT   18   17    6   19   26                                             
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22   26                                                  
CONECT   22   21   23                                                       
CONECT   23   22    2   24                                                  
CONECT   24   23    5   25                                                  
CONECT   25   24   26                                                       
CONECT   26   25   21   18   27                                             
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   64    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₁H₂₆N₂O₄

Average Mass

370.4490 Da

Monoisotopic Mass

370.18926 Da

IUPAC Name

2-hydroxy-1-[(4S,12S,13R,16R,17S,18R,20R)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0^{4,12}.0^{4,20}.0^{5,10}.0^{13,18}]henicosa-5,7,9-trien-11-yl]ethan-1-one

Traditional Name

2-hydroxy-1-[(4S,12S,13R,16R,17S,18R,20R)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0^{4,12}.0^{4,20}.0^{5,10}.0^{13,18}]henicosa-5,7,9-trien-11-yl]ethanone

CAS Registry Number

Not Available

SMILES

C[C@H]1OC[C@H]2[C@@H]3N(C(=O)CO)C4=CC=CC=C4[C@@]33CCN4C[C@@H]1[C@@H]2C[C@@]34O

InChI Identifier

InChI=1S/C21H26N2O4/c1-12-14-9-22-7-6-20-16-4-2-3-5-17(16)23(18(25)10-24)19(20)15(11-27-12)13(14)8-21(20,22)26/h2-5,12-15,19,24,26H,6-11H2,1H3/t12-,13+,14+,15-,19+,20+,21-/m1/s1

InChI Key

PUJOYKKZYBTUSK-LQOCACJHSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Strychnos henningsii	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as strychnos alkaloids. These are alkaloids having a core structure based on the strychnan, stemmadenine (seco-curan), or the akuammicine (curan) skeleton.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Strychnos alkaloids

Sub Class

Not Available

Direct Parent

Strychnos alkaloids

Alternative Parents

Substituents

Strychnan skeleton
Yohimbine alkaloid
Yohimban skeleton
Akuammicine-skeleton
Stemmadenine-skeleton
Carbazole
Indolizidine
Indole or derivatives
Benzenoid
N-alkylpyrrolidine
Piperidine
Oxane
Tertiary carboxylic acid amide
Pyrrolidine
Cyclic alcohol
Hemiaminal
Carboxamide group
Oxacycle
Azacycle
Organoheterocyclic compound
Ether
Dialkyl ether
Carboxylic acid derivative
Alkanolamine
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Organonitrogen compound
Carbonyl group
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.12	ChemAxon
pKa (Strongest Acidic)	12.61	ChemAxon
pKa (Strongest Basic)	8.91	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	73.24 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	99.08 m³·mol⁻¹	ChemAxon
Polarizability	39.4 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

134716697

PDB ID

Not Available

ChEBI ID

141952

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone (NP0331003)

MOL for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

3D MOL for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

3D SDF for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

3D-SDF for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

PDB for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

3D PDB for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

SMILES for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

INCHI for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

Structure for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)

3D Structure for NP0331003 (2-hydroxy-1-[(4s,12s,13r,16r,17s,18r,20r)-20-hydroxy-16-methyl-15-oxa-1,11-diazahexacyclo[15.3.1.0⁴,¹².0⁴,²⁰.0⁵,¹⁰.0¹³,¹⁸]henicosa-5,7,9-trien-11-yl]ethanone)