NP-MRD: Showing NP-Card for (1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde (NP0330722)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

1.0

Created at

2022-09-12 16:20:47 UTC

Updated at

2022-09-12 16:20:47 UTC

NP-MRD ID

NP0330722

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde

Description

(1'R,2'S,3S,5'S,9'R,12'S,13'R,16'S,18'R)-2'-hydroxy-16'-{[(2R,4S,5R,6R)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]Icosane]-13'-carbaldehyde belongs to the class of organic compounds known as cardenolide glycosides and derivatives. Cardenolide glycosides and derivatives are compounds containing a carbohydrate glycosidically bound to the cardenolide moiety. (1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde is found in Apocynum cannabinum. Based on a literature review very few articles have been published on (1'R,2'S,3S,5'S,9'R,12'S,13'R,16'S,18'R)-2'-hydroxy-16'-{[(2R,4S,5R,6R)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]Icosane]-13'-carbaldehyde.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309122218202D          

 39 45  0  0  1  0            999 V2000
    8.8246    0.9289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3311    0.2677    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5118    0.3645    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.0184   -0.2966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1991   -0.1998    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7056   -0.8610    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8863   -0.7642    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3928   -1.4254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5735   -1.3286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2477   -0.5707    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7542   -1.2318    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0800   -1.9897    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4284   -0.4739    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9349   -1.1350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1156   -1.0382    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7898   -0.2803    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7792   -1.1053    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0087   -1.3501    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4850   -0.6765    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9784   -1.3376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7597   -1.0726    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7491   -0.2477    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4103    0.2458    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9613   -0.0028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0085   -0.0153    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0191    0.8096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8069    1.0544    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2832    0.3808    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7049    1.0899    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1025    0.2840    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5960    0.9452    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4153    0.8484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7411    0.0905    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.5604   -0.0063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8732    0.5581    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3667    1.2192    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.0408    1.9772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1860    1.1224    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.6794    1.7836    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  3  2  1  1  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  6  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  1  0  0  0
 11 12  2  0  0  0  0
 10 13  1  0  0  0  0
 13 14  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  1  0  0  0
 17 18  1  0  0  0  0
 19 18  1  1  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 19 24  1  0  0  0  0
 19 25  1  0  0  0  0
 16 25  1  0  0  0  0
 25 26  1  1  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 16 28  1  0  0  0  0
 28 29  1  1  0  0  0
 28 30  1  0  0  0  0
 13 30  1  0  0  0  0
 30 31  1  6  0  0  0
 31 32  1  0  0  0  0
 33 32  1  6  0  0  0
 10 33  1  0  0  0  0
 33 34  1  0  0  0  0
  7 34  1  0  0  0  0
  5 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  6  0  0  0
 36 38  1  0  0  0  0
  3 38  1  0  0  0  0
 38 39  1  1  0  0  0
M  END

     RDKit          3D

 83 89  0  0  0  0  0  0  0  0999 V2000
   -8.4260    1.0705    1.8140 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5963    0.1636    1.1516 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8488    0.7933    0.1641 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.3977    0.6237    0.4016 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7871   -0.6299   -0.0799 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4768   -0.3292   -0.5144 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5209   -1.0251    0.2095 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6934   -1.8241   -0.7651 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2327   -1.7043   -0.4526 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2404   -0.2688   -0.7533 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0006   -0.1345   -2.2431 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5163    0.8535   -2.7177 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6849   -0.1455   -0.5230 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5148   -0.1416   -1.8148 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7752    0.6296   -1.6959 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4442    0.6169   -0.3816 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.4510    1.7717   -0.3560 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3406    1.3765    0.6179 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6278    0.0629    0.2562 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.6757    0.0673   -0.8036 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8868    0.2677   -0.0736 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.7163   -0.1523    1.2343 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6145   -0.1340    2.1040 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3189   -0.6148    1.4161 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3376   -0.5705   -0.1344 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.6712   -1.3601    0.9406 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6976   -0.4266    1.6480 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5498    0.7846    0.7961 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8799    1.9214    1.5655 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1491    1.0134    0.2893 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1720    1.2860    1.4041 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0717    1.7783    0.6941 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6787    0.6489   -0.0665 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5791   -0.0930    0.9381 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4043   -1.2632   -1.1148 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7679   -1.2588   -1.1064 C   0  0  2  0  0  0  0  0  0  0  0  0
   -7.2537   -2.0330   -2.3160 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2113    0.2009   -1.1777 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.5619    0.3080   -1.4639 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8103    1.8639    2.2916 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0358    0.5018    2.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1627    1.5311    1.1002 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0857    1.8868    0.1277 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8644    1.5284   -0.0140 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2193    0.7035    1.5139 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6761   -1.3748    0.7593 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0283   -1.6454    0.9502 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0158   -2.8661   -0.7004 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8370   -1.4407   -1.8048 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0447   -2.0149    0.5590 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3202   -2.3529   -1.1583 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3124   -0.9624   -2.8660 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0458   -1.0719    0.0191 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9415    0.2539   -2.6698 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7861   -1.1973   -2.1057 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5010    0.2238   -2.4589 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5860    1.6817   -2.0203 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9185    2.6725    0.0038 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8839    1.9728   -1.3345 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6110    0.9037   -1.5177 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7837   -0.9164   -1.3015 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8782   -0.3337    2.3740 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3469   -1.7292    1.2702 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5136   -1.1597   -1.0634 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3480   -1.8421    1.6558 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1201   -2.2049    0.4323 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1957   -0.1665    2.6283 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7578   -0.9243    1.9244 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3387    2.6817    1.2979 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1777    1.9118   -0.3610 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9063    0.3143    1.8938 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5470    1.9931    2.1482 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7956    2.1521    1.4463 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2228    2.5886   -0.0036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4256    1.1208   -0.7758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1268    0.7025    1.4881 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0004   -0.6586    1.6675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2187   -1.6628   -0.1609 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8736   -2.8976   -1.9585 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9013   -1.4278   -2.9688 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4137   -2.4192   -2.9188 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5836    0.6860   -1.9454 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7376    1.2653   -1.6520 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  6
 11 12  2  0
 10 33  1  0
 33 32  1  0
 32 31  1  0
 31 30  1  0
 30 13  1  0
 13 14  1  0
 14 15  1  0
 16 15  1  6
 16 17  1  0
 17 18  1  0
 19 18  1  1
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
 22 24  1  0
 19 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  1
 33 34  1  0
  5 35  1  0
 35 36  1  0
 36 37  1  0
 36 38  1  0
 38 39  1  0
 38  3  1  0
 34  7  1  0
 13 10  1  0
 25 16  1  0
 28 30  1  0
 28 16  1  0
 24 19  1  0
  1 40  1  0
  1 41  1  0
  1 42  1  0
  3 43  1  6
  4 44  1  0
  4 45  1  0
  5 46  1  1
  7 47  1  1
  8 48  1  0
  8 49  1  0
  9 50  1  0
  9 51  1  0
 11 52  1  0
 33 75  1  6
 32 73  1  0
 32 74  1  0
 31 71  1  0
 31 72  1  0
 30 70  1  6
 13 53  1  1
 14 54  1  0
 14 55  1  0
 15 56  1  0
 15 57  1  0
 17 58  1  0
 17 59  1  0
 20 60  1  0
 20 61  1  0
 24 62  1  0
 24 63  1  0
 25 64  1  6
 26 65  1  0
 26 66  1  0
 27 67  1  0
 27 68  1  0
 29 69  1  0
 34 76  1  0
 34 77  1  0
 36 78  1  1
 37 79  1  0
 37 80  1  0
 37 81  1  0
 38 82  1  6
 39 83  1  0
M  END


  Mrv1652309122218202D          

 39 45  0  0  1  0            999 V2000
    8.8246    0.9289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3311    0.2677    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5118    0.3645    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.0184   -0.2966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1991   -0.1998    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7056   -0.8610    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8863   -0.7642    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3928   -1.4254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5735   -1.3286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2477   -0.5707    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7542   -1.2318    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0800   -1.9897    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4284   -0.4739    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9349   -1.1350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1156   -1.0382    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7898   -0.2803    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7792   -1.1053    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0087   -1.3501    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4850   -0.6765    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9784   -1.3376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7597   -1.0726    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7491   -0.2477    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4103    0.2458    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9613   -0.0028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0085   -0.0153    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0191    0.8096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8069    1.0544    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2832    0.3808    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7049    1.0899    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1025    0.2840    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5960    0.9452    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4153    0.8484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7411    0.0905    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.5604   -0.0063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8732    0.5581    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3667    1.2192    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.0408    1.9772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1860    1.1224    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.6794    1.7836    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  3  2  1  1  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  6  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  1  0  0  0
 11 12  2  0  0  0  0
 10 13  1  0  0  0  0
 13 14  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  1  0  0  0
 17 18  1  0  0  0  0
 19 18  1  1  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 19 24  1  0  0  0  0
 19 25  1  0  0  0  0
 16 25  1  0  0  0  0
 25 26  1  1  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 16 28  1  0  0  0  0
 28 29  1  1  0  0  0
 28 30  1  0  0  0  0
 13 30  1  0  0  0  0
 30 31  1  6  0  0  0
 31 32  1  0  0  0  0
 33 32  1  6  0  0  0
 10 33  1  0  0  0  0
 33 34  1  0  0  0  0
  7 34  1  0  0  0  0
  5 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  6  0  0  0
 36 38  1  0  0  0  0
  3 38  1  0  0  0  0
 38 39  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0330722

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CO[C@H]1C[C@H](O[C@H]2CC[C@@]3(C=O)[C@H](CC[C@@H]4[C@@H]3CC[C@]35CO[C@]6(COC(=O)C6)[C@H]3CC[C@]45O)C2)O[C@H](C)[C@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C30H44O9/c1-17-26(33)22(35-2)12-25(38-17)39-19-5-8-27(14-31)18(11-19)3-4-21-20(27)6-9-28-15-37-29(13-24(32)36-16-29)23(28)7-10-30(21,28)34/h14,17-23,25-26,33-34H,3-13,15-16H2,1-2H3/t17-,18-,19+,20+,21-,22+,23+,25+,26-,27-,28+,29-,30+/m1/s1

> <INCHI_KEY>
HHOTUENIOYVHKW-UQQXBDFHSA-N

> <FORMULA>
C30H44O9

> <MOLECULAR_WEIGHT>
548.673

> <EXACT_MASS>
548.298532997

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
83

> <JCHEM_AVERAGE_POLARIZABILITY>
58.54744219692124

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1'R,2'S,3S,5'S,9'R,12'S,13'R,16'S,18'R)-2'-hydroxy-16'-{[(2R,4S,5R,6R)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icosane]-13'-carbaldehyde

> <JCHEM_LOGP>
1.6882646636666654

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.144498603819926

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.160778615414387

> <JCHEM_PKA_STRONGEST_BASIC>
-3.196776161283392

> <JCHEM_POLAR_SURFACE_AREA>
120.75000000000001

> <JCHEM_REFRACTIVITY>
137.2775

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(1'R,2'S,3S,5'S,9'R,12'S,13'R,16'S,18'R)-2'-hydroxy-16'-{[(2R,4S,5R,6R)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icosane]-13'-carbaldehyde

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-22         0                                  
HETATM    1  C   UNK     0      16.473   1.734   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      15.551   0.500   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      14.022   0.680   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      13.101  -0.554   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      11.572  -0.373   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      10.650  -1.607   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       9.121  -1.427   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       8.200  -2.661   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.671  -2.480   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.062  -1.065   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.141  -2.299   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       5.749  -3.714   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       4.533  -0.885   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       3.612  -2.119   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.082  -1.938   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.474  -0.523   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.454  -2.063   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      -0.016  -2.520   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      -0.905  -1.263   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -1.826  -2.497   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      -3.285  -2.002   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0      -3.265  -0.462   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -4.499   0.459   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      -1.794  -0.005   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       0.016  -0.029   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.036   1.511   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       1.506   1.968   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       2.395   0.711   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       3.182   2.035   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       3.925   0.530   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       4.846   1.764   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       6.375   1.584   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       6.983   0.169   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       8.513  -0.012   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      10.963   1.042   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      11.884   2.276   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      11.276   3.691   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      13.414   2.095   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0      14.335   3.329   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   38                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   35                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   34                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   13   33                                             
CONECT   11   10   12                                                       
CONECT   12   11                                                            
CONECT   13   10   14   30                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   25   28                                             
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   24   25                                             
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   19                                                       
CONECT   25   19   16   26                                                  
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   16   29   30                                             
CONECT   29   28                                                            
CONECT   30   28   13   31                                                  
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   10   34                                                  
CONECT   34   33    7                                                       
CONECT   35    5   36                                                       
CONECT   36   35   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36    3   39                                                  
CONECT   39   38                                                            
MASTER        0    0    0    0    0    0    0    0   39    0   90    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₄₄O₉

Average Mass

548.6730 Da

Monoisotopic Mass

548.29853 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CO[C@H]1C[C@H](O[C@H]2CC[C@@]3(C=O)[C@H](CC[C@@H]4[C@@H]3CC[C@]35CO[C@]6(COC(=O)C6)[C@H]3CC[C@]45O)C2)O[C@H](C)[C@H]1O

InChI Identifier

InChI=1S/C30H44O9/c1-17-26(33)22(35-2)12-25(38-17)39-19-5-8-27(14-31)18(11-19)3-4-21-20(27)6-9-28-15-37-29(13-24(32)36-16-29)23(28)7-10-30(21,28)34/h14,17-23,25-26,33-34H,3-13,15-16H2,1-2H3/t17-,18-,19+,20+,21-,22+,23+,25+,26-,27-,28+,29-,30+/m1/s1

InChI Key

HHOTUENIOYVHKW-UQQXBDFHSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Apocynum cannabinum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cardenolide glycosides and derivatives. Cardenolide glycosides and derivatives are compounds containing a carbohydrate glycosidically bound to the cardenolide moiety.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Steroid lactones

Direct Parent

Cardenolide glycosides and derivatives

Alternative Parents

Substituents

Cardanolide-glycoside
Steroidal glycoside
19-oxosteroid
14-hydroxysteroid
Hydroxysteroid
Oxosteroid
Glycosyl compound
O-glycosyl compound
Gamma butyrolactone
Monosaccharide
Oxane
Cyclic alcohol
Tetrahydrofuran
Tertiary alcohol
Secondary alcohol
Carboxylic acid ester
Lactone
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Acetal
Dialkyl ether
Ether
Oxacycle
Organoheterocyclic compound
Organic oxygen compound
Aldehyde
Carbonyl group
Organic oxide
Hydrocarbon derivative
Alcohol
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

8545724

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10370279

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde (NP0330722)

MOL for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

3D MOL for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

3D SDF for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

3D-SDF for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

PDB for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

3D PDB for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

SMILES for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

INCHI for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

Structure for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)

3D Structure for NP0330722 ((1'r,2's,3s,5's,9'r,12's,13'r,16's,18'r)-2'-hydroxy-16'-{[(2r,4s,5r,6r)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-5-oxo-7'-oxaspiro[oxolane-3,6'-pentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosane]-13'-carbaldehyde)