NP-MRD: Showing NP-Card for methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate (NP0309199)

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Record Information

Version

1.0

Created at

2022-09-11 03:37:59 UTC

Updated at

2022-09-11 03:38:00 UTC

NP-MRD ID

NP0309199

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate

Description

Methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate is found in Otoba parvifolia. Methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004261500202D          

 30 30  0  0  0  0            999 V2000
   -1.1964   -1.0949    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3714   -1.0949    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0411   -0.3804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8661   -0.3804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2786   -1.0949    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8661   -1.8093    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1036   -1.0949    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5161   -1.8093    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3714    0.3341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3823    0.6696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4685    1.4901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2222    1.8257    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8896    1.3408    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3084    2.6462    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0621    2.9817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1483    3.8022    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9020    4.1378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5694    3.6528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9882    4.9582    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7419    5.2938    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8281    6.1143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5818    6.4498    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6680    7.2703    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2493    5.9649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0389   -0.1508    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7063    0.3341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4909    0.0792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4514    1.1187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6264    1.1187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1414    1.7862    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  3  9  1  0  0  0  0
  9 10  1  0  0  0  0
 11 10  1  4  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 16 15  1  4  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
  9 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
  9 29  1  0  0  0  0
 29 30  1  0  0  0  0
M  END

     RDKit          3D

 70 70  0  0  0  0  0  0  0  0999 V2000
   -7.8898   -2.2092   -0.1662 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5431   -1.8956    0.1333 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5927   -1.8203   -0.8679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8635   -2.0214   -2.0767 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1837   -1.4782   -0.4286 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0328    0.0258   -0.6225 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.0859    0.5583    0.2133 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0886    1.1254   -0.5277 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7486    0.6075   -0.2109 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4956    0.2928   -0.9377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0515   -1.0837   -0.9977 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0356   -1.6566   -0.3771 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2328   -3.1179   -0.5988 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8404   -0.9028    0.5305 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2872   -0.9071    0.0656 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0637   -0.1223    1.0568 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7542    0.9655    0.8317 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4858    1.6387    1.9507 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8440    1.5954   -0.4956 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3130    1.6174   -0.9477 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8417    0.2341   -1.0267 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9048   -0.1805   -0.3664 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7050    0.6606    0.5282 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3284   -1.6196   -0.5452 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4660    0.3523    1.2841 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6110    1.0477    1.8930 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4163    0.7616    2.7301 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6077    2.3846    1.1863 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9245    2.1421   -0.1268 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6068    2.6341   -0.0608 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4400   -2.1974    0.7998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2694   -1.4020   -0.8157 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9269   -3.2022   -0.6238 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5601   -2.0769   -1.1041 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1002   -1.8076    0.6002 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3029    0.2635   -1.6410 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6037    0.4475   -1.2401 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6861    1.9547   -1.1319 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8479    1.6256    0.1462 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7114    1.0253   -0.5887 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6842    0.6810   -2.0197 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5822   -1.7555   -1.6892 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8160   -3.5435    0.2528 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7436   -3.2079   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7037   -3.6949   -0.6479 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4822    0.1270    0.6332 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8828   -1.3791    1.5581 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3109   -0.5545   -0.9520 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5872   -1.9904    0.0865 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0690   -0.4869    2.1128 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1881    0.9628    2.4422 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0595    2.5216    1.6093 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7811    2.0051    2.7265 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5393    2.6830   -0.3763 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2759    1.1149   -1.2940 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8529    2.2712   -0.2470 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3837    2.1165   -1.9475 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2988   -0.4682   -1.6802 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5460    1.1156   -0.0454 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1902    1.4820    1.0164 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1516   -0.0158    1.3195 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4181   -2.2532   -0.5102 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9919   -1.9110    0.2784 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7677   -1.7045   -1.5470 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5686    0.9297    1.5246 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3251   -0.6842    1.5290 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5881    2.8520    1.1393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9522    3.0922    1.7802 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4468    2.5193   -1.0050 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3946    2.9166    0.8860 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  7  1  0
  7  6  1  0
  6  5  1  0
  5  3  1  0
  3  4  2  0
  3  2  1  0
  2  1  1  0
  6  9  1  0
  9 10  1  6
 10 11  1  0
 11 12  2  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  2  3
 22 23  1  0
 22 24  1  0
  9 25  1  0
 25 26  1  0
 26 27  2  0
 26 28  1  0
 28 29  1  0
 29 30  1  0
 29  9  1  0
  8 37  1  0
  8 38  1  0
  8 39  1  0
  6 36  1  6
  5 34  1  0
  5 35  1  0
  1 31  1  0
  1 32  1  0
  1 33  1  0
 10 40  1  0
 10 41  1  0
 11 42  1  0
 13 43  1  0
 13 44  1  0
 13 45  1  0
 14 46  1  0
 14 47  1  0
 15 48  1  0
 15 49  1  0
 16 50  1  0
 18 51  1  0
 18 52  1  0
 18 53  1  0
 19 54  1  0
 19 55  1  0
 20 56  1  0
 20 57  1  0
 21 58  1  0
 23 59  1  0
 23 60  1  0
 23 61  1  0
 24 62  1  0
 24 63  1  0
 24 64  1  0
 25 65  1  0
 25 66  1  0
 28 67  1  0
 28 68  1  0
 29 69  1  6
 30 70  1  0
M  END


  Mrv1533004261500202D          

 30 30  0  0  0  0            999 V2000
   -1.1964   -1.0949    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3714   -1.0949    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0411   -0.3804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8661   -0.3804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2786   -1.0949    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8661   -1.8093    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1036   -1.0949    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5161   -1.8093    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3714    0.3341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3823    0.6696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4685    1.4901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2222    1.8257    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8896    1.3408    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3084    2.6462    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0621    2.9817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1483    3.8022    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9020    4.1378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5694    3.6528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9882    4.9582    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7419    5.2938    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8281    6.1143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5818    6.4498    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6680    7.2703    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2493    5.9649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0389   -0.1508    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7063    0.3341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4909    0.0792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4514    1.1187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6264    1.1187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1414    1.7862    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  3  9  1  0  0  0  0
  9 10  1  0  0  0  0
 11 10  1  4  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 16 15  1  4  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
  9 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
  9 29  1  0  0  0  0
 29 30  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0309199

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(CC(=O)OC)C1(CC=C(C)CCC=C(C)CCC=C(C)C)CC(=O)CC1O

> <INCHI_IDENTIFIER>
InChI=1S/C25H40O5/c1-18(2)9-7-10-19(3)11-8-12-20(4)13-14-25(17-21(26)15-22(25)27)23(29-5)16-24(28)30-6/h9,11,13,22-23,27H,7-8,10,12,14-17H2,1-6H3

> <INCHI_KEY>
OSIGYNJOJJUONY-UHFFFAOYSA-N

> <FORMULA>
C25H40O5

> <MOLECULAR_WEIGHT>
420.59

> <EXACT_MASS>
420.287574388

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
70

> <JCHEM_AVERAGE_POLARIZABILITY>
49.04446081860327

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate

> <ALOGPS_LOGP>
4.57

> <JCHEM_LOGP>
4.373374886666667

> <ALOGPS_LOGS>
-5.11

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
17.16544417011458

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.404552083385767

> <JCHEM_PKA_STRONGEST_BASIC>
-3.055258032053011

> <JCHEM_POLAR_SURFACE_AREA>
72.83

> <JCHEM_REFRACTIVITY>
122.5876

> <JCHEM_ROTATABLE_BOND_COUNT>
13

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.26e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 26-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   26-APR-15         0                                  
HETATM    1  C   UNK     0      -2.233  -2.044   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -0.693  -2.044   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       0.077  -0.710   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.617  -0.710   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.387  -2.044   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       1.617  -3.377   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0       3.927  -2.044   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       4.697  -3.377   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.693   0.624   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.714   1.250   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.875   2.782   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.281   3.408   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.527   2.503   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.442   4.940   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.849   5.566   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.010   7.097   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.417   7.724   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.663   6.819   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       5.578   9.255   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       6.985   9.882   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       7.146  11.413   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.553  12.040   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       8.714  13.571   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       9.799  11.135   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -1.939  -0.282   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -3.185   0.624   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      -4.650   0.148   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      -2.709   2.088   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -1.169   2.088   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      -0.264   3.334   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    9                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7                                                            
CONECT    9    3   10   25   29                                             
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22                                                            
CONECT   25    9   26                                                       
CONECT   26   25   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26   29                                                       
CONECT   29   28    9   30                                                  
CONECT   30   29                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   60    0
END

View in JSmol

Synonyms

Value	Source
Methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoic acid	Generator

Chemical Formula

C₂₅H₄₀O₅

Average Mass

420.5900 Da

Monoisotopic Mass

420.28757 Da

IUPAC Name

methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate

Traditional Name

methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate

CAS Registry Number

Not Available

SMILES

COC(CC(=O)OC)C1(CC=C(C)CCC=C(C)CCC=C(C)C)CC(=O)CC1O

InChI Identifier

InChI=1S/C25H40O5/c1-18(2)9-7-10-19(3)11-8-12-20(4)13-14-25(17-21(26)15-22(25)27)23(29-5)16-24(28)30-6/h9,11,13,22-23,27H,7-8,10,12,14-17H2,1-6H3

InChI Key

OSIGYNJOJJUONY-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Otoba parvifolia	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Diterpenoids

Alternative Parents

Substituents

Diterpenoid
Fatty acid ester
Cyclopentanol
Fatty acyl
Cyclic alcohol
Methyl ester
Secondary alcohol
Ketone
Carboxylic acid ester
Cyclic ketone
Monocarboxylic acid or derivatives
Ether
Dialkyl ether
Carboxylic acid derivative
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Aliphatic homomonocyclic compound

Molecular Framework

Aliphatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.57	ALOGPS
logP	4.37	ChemAxon
logS	-5.1	ALOGPS
pKa (Strongest Acidic)	14.4	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	72.83 Å²	ChemAxon
Rotatable Bond Count	13	ChemAxon
Refractivity	122.59 m³·mol⁻¹	ChemAxon
Polarizability	49.04 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate (NP0309199)

MOL for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

3D MOL for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

3D SDF for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

3D-SDF for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

PDB for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

3D PDB for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

SMILES for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

INCHI for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

Structure for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)

3D Structure for NP0309199 (methyl 3-[2-hydroxy-4-oxo-1-(3,7,11-trimethyldodeca-2,6,10-trien-1-yl)cyclopentyl]-3-methoxypropanoate)