NP-MRD: Showing NP-Card for α-glutinol (NP0155611)

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Record Information

Version

1.0

Created at

2022-09-02 12:42:04 UTC

Updated at

2022-09-02 12:42:04 UTC

NP-MRD ID

NP0155611

Secondary Accession Numbers

None

Natural Product Identification

Common Name

α-glutinol

Description

Alpha-glutinol, also known as α-glutinol, belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. α-glutinol is found in Anadenanthera colubrina, Benincasa hispida, Croton gratissimus, Euphorbia cyparissias, Euphorbia dendroides, Lithocarpus hancei and Sideritis cystosiphon. It was first documented in 2011 (PMID: 22032651). Based on a literature review a small amount of articles have been published on alpha-glutinol (PMID: 25786165) (PMID: 25598629).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309022214422D          

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 16 24  1  0  0  0  0
 12 24  1  0  0  0  0
 24 25  1  6  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 10 28  1  0  0  0  0
 28 29  1  1  0  0  0
 28 30  1  0  0  0  0
  6 30  1  0  0  0  0
 30 31  1  1  0  0  0
  2 31  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0155611

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1(C)CC[C@]2(C)CC[C@]3(C)[C@H]4CC=C5[C@@H](CC[C@@H](O)C5(C)C)[C@]4(C)CC[C@@]3(C)[C@@H]2C1

> <INCHI_IDENTIFIER>
InChI=1S/C30H50O/c1-25(2)13-14-27(5)15-17-29(7)22-11-9-20-21(10-12-24(31)26(20,3)4)28(22,6)16-18-30(29,8)23(27)19-25/h9,21-24,31H,10-19H2,1-8H3/t21-,22+,23-,24-,27-,28+,29-,30+/m1/s1

> <INCHI_KEY>
HFSACQSILLSUII-VXRRTDEQSA-N

> <FORMULA>
C30H50O

> <MOLECULAR_WEIGHT>
426.729

> <EXACT_MASS>
426.38616623

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
81

> <JCHEM_AVERAGE_POLARIZABILITY>
54.080018006419834

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3R,6aS,6bR,8aR,12aR,12bS,14aR,14bS)-4,4,6b,8a,11,11,12b,14a-octamethyl-1,2,3,4,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14,14a,14b-icosahydropicen-3-ol

> <ALOGPS_LOGP>
7.45

> <JCHEM_LOGP>
7.403140834333334

> <ALOGPS_LOGS>
-6.84

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
19.408471039623986

> <JCHEM_PKA_STRONGEST_BASIC>
-0.8705347672684683

> <JCHEM_POLAR_SURFACE_AREA>
20.23

> <JCHEM_REFRACTIVITY>
131.9073

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
6.19e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3R,6aS,6bR,8aR,12aR,12bS,14aR,14bS)-4,4,6b,8a,11,11,12b,14a-octamethyl-1,2,3,6,6a,7,8,9,10,12,12a,13,14,14b-tetradecahydropicen-3-ol

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 02-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   02-SEP-22         0                                  
HETATM    1  C   UNK     0      -8.886  -1.990   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -7.438  -2.516   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -7.171  -1.000   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -8.208  -3.850   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -7.438  -5.184   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -5.898  -5.184   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -6.668  -6.517   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -5.128  -6.517   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -3.588  -6.517   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -2.818  -5.184   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.048  -6.517   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -1.278  -5.184   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.508  -6.517   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.032  -6.517   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.802  -5.184   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.032  -3.850   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.802  -2.516   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.342  -2.516   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       4.112  -3.850   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       5.652  -3.850   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       3.342  -5.184   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.648  -6.000   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       3.395  -6.723   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -0.508  -3.850   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       0.262  -2.516   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -1.278  -2.516   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -2.818  -2.516   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -3.588  -3.850   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -4.358  -2.516   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -5.128  -3.850   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -5.898  -2.516   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4   31                                             
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7    8   30                                             
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12   28                                             
CONECT   11   10                                                            
CONECT   12   10   13   24                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   21                                                  
CONECT   16   15   17   24                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   15   22   23                                             
CONECT   22   21                                                            
CONECT   23   21                                                            
CONECT   24   16   12   25   26                                             
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   10   29   30                                             
CONECT   29   28                                                            
CONECT   30   28    6   31                                                  
CONECT   31   30    2                                                       
MASTER        0    0    0    0    0    0    0    0   31    0   70    0
END

View in JSmol

Synonyms

Value	Source
a-Glutinol	Generator
Α-glutinol	Generator

Chemical Formula

C₃₀H₅₀O

Average Mass

426.7290 Da

Monoisotopic Mass

426.38617 Da

IUPAC Name

(3R,6aS,6bR,8aR,12aR,12bS,14aR,14bS)-4,4,6b,8a,11,11,12b,14a-octamethyl-1,2,3,4,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14,14a,14b-icosahydropicen-3-ol

Traditional Name

(3R,6aS,6bR,8aR,12aR,12bS,14aR,14bS)-4,4,6b,8a,11,11,12b,14a-octamethyl-1,2,3,6,6a,7,8,9,10,12,12a,13,14,14b-tetradecahydropicen-3-ol

CAS Registry Number

Not Available

SMILES

CC1(C)CC[C@]2(C)CC[C@]3(C)[C@H]4CC=C5[C@@H](CC[C@@H](O)C5(C)C)[C@]4(C)CC[C@@]3(C)[C@@H]2C1

InChI Identifier

InChI=1S/C30H50O/c1-25(2)13-14-27(5)15-17-29(7)22-11-9-20-21(10-12-24(31)26(20,3)4)28(22,6)16-18-30(29,8)23(27)19-25/h9,21-24,31H,10-19H2,1-8H3/t21-,22+,23-,24-,27-,28+,29-,30+/m1/s1

InChI Key

HFSACQSILLSUII-VXRRTDEQSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Anadenanthera colubrina	LOTUS Database	35616633
Benincasa hispida	LOTUS Database	35616633
Croton gratissimus	LOTUS Database	35616633
Euphorbia cyparissias	LOTUS Database	35616633
Euphorbia dendroides	LOTUS Database	35616633
Lithocarpus hancei	LOTUS Database	35616633
Sideritis cystosiphon	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
Cyclic alcohol
Secondary alcohol
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

organic hydroxy compound (CHEBI:68874 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	7.45	ALOGPS
logP	7.4	ChemAxon
logS	-6.8	ALOGPS
pKa (Strongest Acidic)	19.41	ChemAxon
pKa (Strongest Basic)	-0.87	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	20.23 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	131.91 m³·mol⁻¹	ChemAxon
Polarizability	54.08 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

35518193

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

12309496

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Langat MK, Crouch NR, Smith PJ, Mulholland DA: Cembranolides from the leaves of Croton gratissimus. J Nat Prod. 2011 Nov 28;74(11):2349-55. doi: 10.1021/np2002012. Epub 2011 Oct 27. [PubMed:22032651 ]
Mira A, Yamashita S, Katakura Y, Shimizu K: In vitro neuroprotective activities of compounds from Angelica shikokiana Makino. Molecules. 2015 Mar 16;20(3):4813-32. doi: 10.3390/molecules20034813. [PubMed:25786165 ]
Abdel-Sattar E, Abou-Hussein D, Petereit F: Chemical Constituents from the Leaves of Euphorbia ammak Growing in Saudi Arabia. Pharmacognosy Res. 2015 Jan-Mar;7(1):14-7. doi: 10.4103/0974-8490.147136. [PubMed:25598629 ]
LOTUS database [Link]

Showing NP-Card for α-glutinol (NP0155611)

MOL for NP0155611 (α-glutinol)

3D MOL for NP0155611 (α-glutinol)

3D SDF for NP0155611 (α-glutinol)

3D-SDF for NP0155611 (α-glutinol)

PDB for NP0155611 (α-glutinol)

3D PDB for NP0155611 (α-glutinol)

SMILES for NP0155611 (α-glutinol)

INCHI for NP0155611 (α-glutinol)

Structure for NP0155611 (α-glutinol)

3D Structure for NP0155611 (α-glutinol)