NP-MRD: Showing NP-Card for methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate (NP0145561)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

1.0

Created at

2022-09-02 00:47:21 UTC

Updated at

2022-09-02 00:47:21 UTC

NP-MRD ID

NP0145561

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate

Description

Methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]Icosa-1(20),2(10),4,6,8,11,14,16,18-nonaen-20-yl}-2-oxoacetate belongs to the class of organic compounds known as beta carbolines. Beta carbolines are compounds containing a 9H-pyrido[3,4-b]indole moiety. methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate is found in Fascaplysinopsis reticulata. Methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]Icosa-1(20),2(10),4,6,8,11,14,16,18-nonaen-20-yl}-2-oxoacetate is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004161514332D          

 26 30  0  0  0  0            999 V2000
    3.1931   -7.4848    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8062   -6.9328    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6347   -6.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8501   -5.8708    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2478   -5.5737    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0324   -5.8287    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0762   -4.7668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3226   -4.4312    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5689   -4.7668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9015   -4.2819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9877   -3.4614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7414   -3.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4088   -3.6107    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2158   -3.4392    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.6283   -2.7247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4533   -2.7247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8658   -3.4392    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6727   -3.6107    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3402   -3.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0939   -3.4614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1801   -4.2819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5127   -4.7668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7590   -4.4312    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0053   -4.7668    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.4533   -4.1537    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6283   -4.1537    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
  8 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 18 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 17 25  2  0  0  0  0
 25 26  1  0  0  0  0
  7 26  2  0  0  0  0
 14 26  1  0  0  0  0
M  END

     RDKit          3D

 40 44  0  0  0  0  0  0  0  0999 V2000
    2.5267   -4.5328   -0.5321 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2482   -3.3206   -1.1980 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0013   -2.1666   -0.5042 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0224   -2.1838    0.7492 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7139   -0.9148   -1.1848 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6841   -0.8589   -2.4444 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4520    0.3095   -0.4462 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4078    1.2397   -0.0480 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7808    1.2754   -0.2212 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5435    2.3106    0.2644 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9033    3.3244    0.9358 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5346    3.2834    1.1054 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7491    2.2550    0.6268 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4344    1.9553    0.6405 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6151    2.6153    1.1669 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8909    2.0891    1.0453 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1145    0.8995    0.3951 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2759    0.1946    0.1550 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6078    0.3952    0.4579 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5195   -0.5531    0.0431 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1445   -1.6861   -0.6592 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8047   -1.8533   -0.9440 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8769   -0.9292   -0.5454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5274   -0.8821   -0.7087 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0326    0.2313   -0.1405 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2328    0.7793   -0.0050 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8331   -5.2894   -0.9282 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5738   -4.8914   -0.7510 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3555   -4.4556    0.5593 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2731    0.4754   -0.7492 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6030    2.3289    0.1254 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4980    4.1436    1.3213 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0592    4.0896    1.6345 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4252    3.5384    1.6691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7239    2.6112    1.4620 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9297    1.2704    1.0049 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5722   -0.3775    0.2922 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9069   -2.3903   -0.9552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5313   -2.7414   -1.4916 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9316   -1.5879   -1.1973 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  2  0
  5  7  1  0
  7 26  2  0
 26 14  1  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 25  2  0
 25 24  1  0
 24 23  1  0
 23 22  2  0
 22 21  1  0
 21 20  2  0
 20 19  1  0
 19 18  2  0
 14 13  1  0
 13  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
  8  7  1  0
 25 26  1  0
 18 23  1  0
 12 13  1  0
 18 17  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
 15 34  1  0
 16 35  1  0
 24 40  1  0
 22 39  1  0
 21 38  1  0
 20 37  1  0
 19 36  1  0
  9 30  1  0
 10 31  1  0
 11 32  1  0
 12 33  1  0
M  END


  Mrv1533004161514332D          

 26 30  0  0  0  0            999 V2000
    3.1931   -7.4848    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8062   -6.9328    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6347   -6.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8501   -5.8708    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2478   -5.5737    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0324   -5.8287    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0762   -4.7668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3226   -4.4312    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5689   -4.7668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9015   -4.2819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9877   -3.4614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7414   -3.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4088   -3.6107    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2158   -3.4392    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.6283   -2.7247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4533   -2.7247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8658   -3.4392    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6727   -3.6107    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3402   -3.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0939   -3.4614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1801   -4.2819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5127   -4.7668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7590   -4.4312    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0053   -4.7668    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.4533   -4.1537    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6283   -4.1537    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
  8 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 18 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 17 25  2  0  0  0  0
 25 26  1  0  0  0  0
  7 26  2  0  0  0  0
 14 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0145561

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)C(=O)C1=C2N(C=CC3=C2NC2=CC=CC=C32)C2=C1C=CC=C2

> <INCHI_IDENTIFIER>
InChI=1S/C21H14N2O3/c1-26-21(25)20(24)17-14-7-3-5-9-16(14)23-11-10-13-12-6-2-4-8-15(12)22-18(13)19(17)23/h2-11,22H,1H3

> <INCHI_KEY>
JSCOOTAVKPBHTB-UHFFFAOYSA-N

> <FORMULA>
C21H14N2O3

> <MOLECULAR_WEIGHT>
342.354

> <EXACT_MASS>
342.100442319

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
40

> <JCHEM_AVERAGE_POLARIZABILITY>
36.93954795408351

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4,6,8,11,14(19),15,17-nonaen-20-yl}-2-oxoacetate

> <ALOGPS_LOGP>
3.93

> <JCHEM_LOGP>
3.642746602999999

> <ALOGPS_LOGS>
-6.10

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.43806279254331

> <JCHEM_PKA_STRONGEST_BASIC>
-7.818975128930024

> <JCHEM_POLAR_SURFACE_AREA>
63.57

> <JCHEM_REFRACTIVITY>
98.84940000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.74e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4,6,8,11,14(19),15,17-nonaen-20-yl}-2-oxoacetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 16-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   16-APR-15         0                                  
HETATM    1  C   UNK     0       5.960 -13.972   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       7.105 -12.941   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       6.785 -11.435   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       5.320 -10.959   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       7.929 -10.404   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       9.394 -10.880   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       7.609  -8.898   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.202  -8.272   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.795  -8.898   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.549  -7.993   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.710  -6.461   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.117  -5.835   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.363  -6.740   0.000  0.00  0.00           C+0
HETATM   14  N   UNK     0       7.869  -6.420   0.000  0.00  0.00           N+0
HETATM   15  C   UNK     0       8.639  -5.086   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.179  -5.086   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      10.949  -6.420   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      12.456  -6.740   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      13.702  -5.835   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      15.109  -6.461   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      15.270  -7.993   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      14.024  -8.898   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      12.617  -8.272   0.000  0.00  0.00           C+0
HETATM   24  N   UNK     0      11.210  -8.898   0.000  0.00  0.00           N+0
HETATM   25  C   UNK     0      10.179  -7.754   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.639  -7.754   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8   26                                                  
CONECT    8    7    9   13                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12    8   14                                                  
CONECT   14   13   15   26                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   25                                                  
CONECT   18   17   19   23                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   18   24                                                  
CONECT   24   23   25                                                       
CONECT   25   24   17   26                                                  
CONECT   26   25    7   14                                                  
MASTER        0    0    0    0    0    0    0    0   26    0   60    0
END

View in JSmol

Synonyms

Value	Source
Methyl 2-{3,13-diazapentacyclo[11.7.0.0,.0,.0,]icosa-1(20),2(10),4,6,8,11,14,16,18-nonaen-20-yl}-2-oxoacetic acid	Generator

Chemical Formula

C₂₁H₁₄N₂O₃

Average Mass

342.3540 Da

Monoisotopic Mass

342.10044 Da

IUPAC Name

methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4,6,8,11,14(19),15,17-nonaen-20-yl}-2-oxoacetate

Traditional Name

methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4,6,8,11,14(19),15,17-nonaen-20-yl}-2-oxoacetate

CAS Registry Number

Not Available

SMILES

COC(=O)C(=O)C1=C2N(C=CC3=C2NC2=CC=CC=C32)C2=C1C=CC=C2

InChI Identifier

InChI=1S/C21H14N2O3/c1-26-21(25)20(24)17-14-7-3-5-9-16(14)23-11-10-13-12-6-2-4-8-15(12)22-18(13)19(17)23/h2-11,22H,1H3

InChI Key

JSCOOTAVKPBHTB-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Fascaplysinopsis reticulata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as beta carbolines. Beta carbolines are compounds containing a 9H-pyrido[3,4-b]indole moiety.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Pyridoindoles

Direct Parent

Beta carbolines

Alternative Parents

Substituents

Beta-carboline
Indole-3-acetic acid derivative
Indole
Indolizine
Pyrrolopyridine
Aryl ketone
Alpha-keto acid
Keto acid
Pyridine
Substituted pyrrole
Benzenoid
Vinylogous amide
Pyrrole
Heteroaromatic compound
Methyl ester
Ketone
Carboxylic acid ester
Azacycle
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Carbonyl group
Organic oxide
Organopnictogen compound
Organic oxygen compound
Organonitrogen compound
Organooxygen compound
Organic nitrogen compound
Hydrocarbon derivative
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.93	ALOGPS
logP	3.64	ChemAxon
logS	-6.1	ALOGPS
pKa (Strongest Acidic)	13.44	ChemAxon
pKa (Strongest Basic)	-7.8	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	63.57 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	98.85 m³·mol⁻¹	ChemAxon
Polarizability	36.94 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

378602

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate (NP0145561)

MOL for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

3D MOL for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

3D SDF for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

3D-SDF for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

PDB for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

3D PDB for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

SMILES for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

INCHI for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

Structure for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)

3D Structure for NP0145561 (methyl 2-{3,13-diazapentacyclo[11.7.0.0²,¹⁰.0⁴,⁹.0¹⁴,¹⁹]icosa-1(20),2(10),4(9),5,7,11,14,16,18-nonaen-20-yl}-2-oxoacetate)