Np mrd loader

Record Information
Version1.0
Created at2022-04-29 05:06:36 UTC
Updated at2022-04-29 05:06:36 UTC
NP-MRD IDNP0084357
Secondary Accession NumbersNone
Natural Product Identification
Common NamePomegraniin A
Description1-{3,4,5,11,17,18,19-Heptahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0²,⁷]Nonadeca-1(19),2,4,6,15,17-hexaen-10-yl}-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl 2-{[12-(2-{2-[(12-{2-[2-({3,4,11,17,18,19-hexahydroxy-8,14-dioxo-12-[3-oxo-1,2-bis(3,4,5-trihydroxybenzoyloxy)propyl]-9,13-dioxatricyclo[13.4.0.0²,⁷]Nonadeca-1(19),2,4,6,15,17-hexaen-5-yl}oxy)-3,4,5-trihydroxybenzoyloxy]-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propyl}-3,4,11,17,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0²,⁷]Nonadeca-1(19),2,4,6,15,17-hexaen-5-yl)oxy]-3,4,5-trihydroxybenzoyloxy}-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propyl)-3,4,11,17,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0²,⁷]Nonadeca-1(19),2,4,6,15,17-hexaen-5-yl]oxy}-3,4,5-trihydroxybenzoate belongs to the class of organic compounds known as hydrolyzable tannins. These are tannins with a structure characterized by either of the following models. In model 1, the structure contains galloyl units (in some cases, shikimic acid units) that are linked to diverse polyol carbohydrate-, catechin-, or triterpenoid units. In model 2, contains at least two galloyl units C-C coupled to each other, and do not contain a glycosidically linked catechin unit. Pomegraniin A is found in Punica granatum . It was first documented in 2022 (PMID: 35501128). Based on a literature review a significant number of articles have been published on 1-{3,4,5,11,17,18,19-heptahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0²,⁷]Nonadeca-1(19),2,4,6,15,17-hexaen-10-yl}-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl 2-{[12-(2-{2-[(12-{2-[2-({3,4,11,17,18,19-hexahydroxy-8,14-dioxo-12-[3-oxo-1,2-bis(3,4,5-trihydroxybenzoyloxy)propyl]-9,13-dioxatricyclo[13.4.0.0²,⁷]Nonadeca-1(19),2,4,6,15,17-hexaen-5-yl}oxy)-3,4,5-trihydroxybenzoyloxy]-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propyl}-3,4,11,17,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0²,⁷]Nonadeca-1(19),2,4,6,15,17-hexaen-5-yl)oxy]-3,4,5-trihydroxybenzoyloxy}-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propyl)-3,4,11,17,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0²,⁷]Nonadeca-1(19),2,4,6,15,17-hexaen-5-yl]oxy}-3,4,5-trihydroxybenzoate (PMID: 35501127) (PMID: 35501126) (PMID: 35501125) (PMID: 35501124) (PMID: 35501123) (PMID: 35501122).
Structure
Thumb
Synonyms
ValueSource
1-{3,4,5,11,17,18,19-heptahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0,]nonadeca-1(19),2,4,6,15,17-hexaen-10-yl}-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl 2-{[12-(2-{2-[(12-{2-[2-({3,4,11,17,18,19-hexahydroxy-8,14-dioxo-12-[3-oxo-1,2-bis(3,4,5-trihydroxybenzoyloxy)propyl]-9,13-dioxatricyclo[13.4.0.0,]nonadeca-1(19),2,4,6,15,17-hexaen-5-yl}oxy)-3,4,5-trihydroxybenzoyloxy]-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propyl}-3,4,11,17,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0,]nonadeca-1(19),2,4,6,15,17-hexaen-5-yl)oxy]-3,4,5-trihydroxybenzoyloxy}-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propyl)-3,4,11,17,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0,]nonadeca-1(19),2,4,6,15,17-hexaen-5-yl]oxy}-3,4,5-trihydroxybenzoic acidGenerator
Chemical FormulaC136H98O88
Average Mass3140.1920 Da
Monoisotopic Mass3138.31934 Da
IUPAC Name1-(17-{6-[({1-[17-(6-{[(1-{3,4,5,11,17,18,19-heptahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0^{2,7}]nonadeca-1(15),2(7),3,5,16,18-hexaen-10-yl}-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl)oxy]carbonyl}-2,3,4-trihydroxyphenoxy)-3,4,5,11,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0^{2,7}]nonadeca-1(15),2(7),3,5,16,18-hexaen-10-yl]-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl}oxy)carbonyl]-2,3,4-trihydroxyphenoxy}-3,4,5,11,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0^{2,7}]nonadeca-1(15),2(7),3,5,16,18-hexaen-10-yl)-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl 2-({3,4,11,17,18,19-hexahydroxy-8,14-dioxo-12-[3-oxo-1,2-bis(3,4,5-trihydroxybenzoyloxy)propyl]-9,13-dioxatricyclo[13.4.0.0^{2,7}]nonadeca-1(15),2(7),3,5,16,18-hexaen-5-yl}oxy)-3,4,5-trihydroxybenzoate
Traditional Name1-(17-{6-[({1-[17-(6-{[(1-{3,4,5,11,17,18,19-heptahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0^{2,7}]nonadeca-1(15),2(7),3,5,16,18-hexaen-10-yl}-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl)oxy]carbonyl}-2,3,4-trihydroxyphenoxy)-3,4,5,11,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0^{2,7}]nonadeca-1(15),2(7),3,5,16,18-hexaen-10-yl]-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl}oxy)carbonyl]-2,3,4-trihydroxyphenoxy}-3,4,5,11,18,19-hexahydroxy-8,14-dioxo-9,13-dioxatricyclo[13.4.0.0^{2,7}]nonadeca-1(15),2(7),3,5,16,18-hexaen-10-yl)-3-oxo-1-(3,4,5-trihydroxybenzoyloxy)propan-2-yl 2-({3,4,11,17,18,19-hexahydroxy-8,14-dioxo-12-[3-oxo-1,2-bis(3,4,5-trihydroxybenzoyloxy)propyl]-9,13-dioxatricyclo[13.4.0.0^{2,7}]nonadeca-1(15),2(7),3,5,16,18-hexaen-5-yl}oxy)-3,4,5-trihydroxybenzoate
CAS Registry NumberNot Available
SMILES
OC1COC(=O)C2=C(C(O)=C(O)C(O)=C2)C2=C(C=C(O)C(O)=C2O)C(=O)OC1C(OC(=O)C1=CC(O)=C(O)C(O)=C1)C(OC(=O)C1=C(OC2=CC3=C(C(O)=C2O)C2=C(C=C(O)C(O)=C2O)C(=O)OC(C(OC(=O)C2=CC(O)=C(O)C(O)=C2)C(OC(=O)C2=C(OC4=CC5=C(C(O)=C4O)C4=C(C=C(O)C(O)=C4O)C(=O)OC(C(OC(=O)C4=CC(O)=C(O)C(O)=C4)C(OC(=O)C4=C(OC6=CC7=C(C(O)=C6O)C6=C(C=C(O)C(O)=C6O)C(=O)OC(C(OC(=O)C6=CC(O)=C(O)C(O)=C6)C(OC(=O)C6=CC(O)=C(O)C(O)=C6)C=O)C(O)COC7=O)C(O)=C(O)C(O)=C4)C=O)C(O)COC5=O)C(O)=C(O)C(O)=C2)C=O)C(O)COC3=O)C(O)=C(O)C(O)=C1)C=O
InChI Identifier
InChI=1S/C136H98O88/c137-22-71(213-121(190)30-1-46(141)83(163)47(142)2-30)117(221-122(191)31-3-48(143)84(164)49(144)4-31)113-65(160)27-207-127(196)40-19-68(96(176)104(184)80(40)77-37(131(200)217-113)13-58(153)90(170)101(77)181)210-111-44(17-62(157)94(174)108(111)188)135(204)215-73(24-139)119(223-124(193)33-7-52(147)86(166)53(148)8-33)115-67(162)29-209-129(198)42-21-70(98(178)106(186)82(42)79-39(133(202)219-115)15-60(155)92(172)103(79)183)212-112-45(18-63(158)95(175)109(112)189)136(205)216-74(25-140)120(224-125(194)34-9-54(149)87(167)55(150)10-34)116-66(161)28-208-128(197)41-20-69(97(177)105(185)81(41)78-38(132(201)220-116)14-59(154)91(171)102(78)182)211-110-43(16-61(156)93(173)107(110)187)134(203)214-72(23-138)118(222-123(192)32-5-50(145)85(165)51(146)6-32)114-64(159)26-206-126(195)35-11-56(151)88(168)99(179)75(35)76-36(130(199)218-114)12-57(152)89(169)100(76)180/h1-25,64-67,71-74,113-120,141-189H,26-29H2
InChI KeyRDOJBXYQMIBTET-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Punica granatumPlant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as hydrolyzable tannins. These are tannins with a structure characterized by either of the following models. In model 1, the structure contains galloyl units (in some cases, shikimic acid units) that are linked to diverse polyol carbohydrate-, catechin-, or triterpenoid units. In model 2, contains at least two galloyl units C-C coupled to each other, and do not contain a glycosidically linked catechin unit.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassTannins
Sub ClassHydrolyzable tannins
Direct ParentHydrolyzable tannins
Alternative Parents
Substituents
  • Hydrolyzable tannin
  • Galloyl ester
  • Gallic acid or derivatives
  • P-hydroxybenzoic acid alkyl ester
  • M-hydroxybenzoic acid ester
  • P-hydroxybenzoic acid ester
  • Dihydroxybenzoic acid
  • Diaryl ether
  • Benzoate ester
  • Pyrogallol derivative
  • Benzoic acid or derivatives
  • Benzenetriol
  • Phenoxy compound
  • Phenol ether
  • Benzoyl
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Benzenoid
  • Monosaccharide
  • Monocyclic benzene moiety
  • Secondary alcohol
  • Lactone
  • Carboxylic acid ester
  • Oxacycle
  • Organoheterocyclic compound
  • Polyol
  • Ether
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aldehyde
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.48ALOGPS
logP7.67ChemAxon
logS-3ALOGPS
pKa (Strongest Acidic)6.17ChemAxon
pKa (Strongest Basic)-5.9ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count69ChemAxon
Hydrogen Donor Count49ChemAxon
Polar Surface Area1508.04 ŲChemAxon
Rotatable Bond Count42ChemAxon
Refractivity712.54 m³·mol⁻¹ChemAxon
Polarizability270.51 ųChemAxon
Number of Rings20ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00053699
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound163183819
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
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  2. Ritonja JA, Aronson KJ, Leung M, Flaten L, Topouza DG, Duan QL, Durocher F, Tranmer JE, Bhatti P: Investigating the relationship between melatonin patterns and methylation in circadian genes among day shift and night shift workers. Occup Environ Med. 2022 May 2. pii: oemed-2021-108111. doi: 10.1136/oemed-2021-108111. [PubMed:35501127 ]
  3. Kelly-Reif K, Bertke SJ, Samet J, Sood A, Schubauer-Berigan MK: Health burdens of uranium miners will extend beyond the radiation exposure compensation act deadline. Occup Environ Med. 2022 May 2. pii: oemed-2022-108311. doi: 10.1136/oemed-2022-108311. [PubMed:35501126 ]
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  6. Shraim MA, Masse-Alarie H, Salomoni SE, Hodges PW: Can training of a skilled pelvic movement change corticomotor control of back muscles? Comparison of single and paired-pulse transcranial magnetic stimulation. Eur J Neurosci. 2022 May 2. doi: 10.1111/ejn.15683. [PubMed:35501123 ]
  7. Tupetz A, Quirici M, Sultana M, Hoque KI, Stewart KA, Landry M: Exploring the intersection of critical disability studies, humanities and global health through a case study of scarf injuries in Bangladesh. Med Humanit. 2022 Jun;48(2):169-176. doi: 10.1136/medhum-2021-012244. Epub 2022 May 2. [PubMed:35501122 ]
  8. Chiocchia V, White IR, Salanti G: The complexity underlying treatment rankings: how to use them and what to look at. BMJ Evid Based Med. 2022 May 2. pii: bmjebm-2021-111904. doi: 10.1136/bmjebm-2021-111904. [PubMed:35501121 ]
  9. Chang DS, Jiang Y, Kim JA, Huang S, Munoz B, Aung T, He M, Foster PJ, Friedman D: Cataract progression after Nd:YAG laser iridotomy in primary angle-closure suspect eyes. Br J Ophthalmol. 2022 May 2. pii: bjophthalmol-2021-320929. doi: 10.1136/bjophthalmol-2021-320929. [PubMed:35501120 ]
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