NP-MRD: Showing NP-Card for (+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+ (NP0036791)

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Record Information

Version

1.0

Created at

2021-06-20 19:52:19 UTC

Updated at

2021-06-30 00:08:38 UTC

NP-MRD ID

NP0036791

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+

Provided By

JEOL Database JEOL Logo

Description

CHEMBL2063152 belongs to the class of organic compounds known as 1-hydroxysteroids. These are steroids carrying a hydroxyl group at the 1-position of the steroid backbone. (+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+ is found in Bambusa emeiensis and Sinocalamus aff inis. It was first documented in 2012 (Xiong, L., et al.). Based on a literature review very few articles have been published on CHEMBL2063152.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202121523D          

 80 84  0  0  0  0            999 V2000
   -6.1282    3.5560    0.2817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6449    3.3376    0.6224 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -4.8400   -1.5745    0.5534 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

 80 84  0  0  0  0  0  0  0  0999 V2000
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   -4.6449    3.3376    0.6224 C   0  0  2  0  0  0  0  0  0  0  0  0
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    2.9390    0.4540   -2.1765 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2010   -4.2709   -0.2490 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1393   -3.2672    0.7510 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7063   -2.6774   -0.8089 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1897   -5.3495   -2.5139 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5619   -4.8433   -2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1925   -3.7083   -4.0515 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6592   -6.2859   -0.4485 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2604   -4.6817    1.4124 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3547   -7.1309   -0.1314 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5737   -6.4549   -1.7379 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5519   -5.5807   -1.0848 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0180   -5.4096    0.6130 H   0  0  0  0  0  0  0  0  0  0  0  0
 12  9  1  0
  8  9  1  0
 23 24  1  0
 24 25  1  0
 25 16  1  0
 17 16  1  0
 27 23  1  0
  9  4  1  0
  4  5  1  0
  5  6  1  0
  6  8  1  0
 22 34  1  0
 31 32  1  0
 22 23  2  0
 27 28  1  1
 25 26  1  0
 17 18  2  0
 16 58  1  1
 16 14  1  0
 20 21  1  1
 20 19  1  0
  9 10  1  1
 19 18  1  0
  4  2  1  0
 20 14  1  0
  6  7  1  0
 33 31  1  0
  8 47  1  6
 33 34  1  0
 14 15  1  6
 31 27  1  0
 27 29  1  0
 22 17  1  0
 10 11  1  0
 20  8  1  0
  2  1  1  0
 14 13  1  0
  2  3  1  0
 13 12  1  0
 29 30  1  0
 33 77  1  0
 33 78  1  0
 31 75  1  1
 34 79  1  0
 34 80  1  0
 24 65  1  0
 24 66  1  0
 25 67  1  6
 19 60  1  0
 19 61  1  0
 18 59  1  0
 13 53  1  0
 13 54  1  0
 12 51  1  0
 12 52  1  0
  4 42  1  6
  5 43  1  0
  5 44  1  0
  6 45  1  1
 32 76  1  0
 28 69  1  0
 28 70  1  0
 28 71  1  0
 26 68  1  0
 21 62  1  0
 21 63  1  0
 21 64  1  0
 10 48  1  0
 10 49  1  0
  2 38  1  1
  7 46  1  0
 15 55  1  0
 15 56  1  0
 15 57  1  0
 29 72  1  0
 29 73  1  0
 11 50  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
  3 39  1  0
  3 40  1  0
  3 41  1  0
 30 74  1  0
M  END


  Mrv1652306202121523D          

 80 84  0  0  0  0            999 V2000
   -6.1282    3.5560    0.2817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6449    3.3376    0.6224 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.8276    4.4188   -0.0888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1961    1.8992    0.2512 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.0692    0.8104    0.9452 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.1862   -0.4389    1.1066 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8400   -1.5745    0.5534 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9257   -0.0946    0.3128 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7215    1.4351    0.5414 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.2628    1.9143    1.9477 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0664    1.4241    3.0071 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6738    1.9072   -0.4869 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3744    1.0667   -0.4657 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5803   -0.4692   -0.6723 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0526   -0.6458   -2.1554 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7517   -1.3228   -0.4750 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4755   -2.8483   -0.4443 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7810   -3.3081   -0.2433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0003   -2.4603    0.0210 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6566   -0.9959    0.3904 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0927   -1.0350    1.8428 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6307   -3.7674   -0.6134 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8780   -3.3048   -0.8808 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1288   -1.8340   -1.1195 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8796   -1.0333   -1.4898 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2489    0.3461   -1.4988 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1285   -4.2232   -0.9572 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.3583   -3.5703   -0.2792 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4581   -4.5360   -2.4500 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.0182   -3.4207   -3.1385 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8506   -5.5776   -0.2312 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8364   -5.4369    1.1943 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5345   -6.1945   -0.6741 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.3605   -5.2544   -0.4191 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.4358    4.5803    0.5197 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3188    3.3854   -0.7834 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7762    2.8874    0.8563 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5416    3.4875    1.7037 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2662    5.4101    0.0712 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7858    4.2413   -1.1686 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8069    4.4687    0.2953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3654    1.7900   -0.8318 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9662    0.6034    0.3499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4077    1.1446    1.9326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9887   -0.6539    2.1588 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6597   -1.7015    1.0616 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2583   -0.2112   -0.7302 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2890    3.0075    2.0008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2283    1.6501    2.1621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6965    1.7814    3.8334 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3954    2.9509   -0.3086 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1005    1.8855   -1.4968 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1718    1.2509    0.4653 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2535    1.4774   -1.2627 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0993   -1.6935   -2.4655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0360   -0.2132   -2.3504 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3643   -0.1450   -2.8461 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1566   -1.0494    0.5104 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0075   -4.3695   -0.2341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5636   -2.9257    0.8402 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6465   -2.5087   -0.8637 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4723   -1.9181    2.0308 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8909   -1.0787    2.5885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4536   -0.1839    2.0739 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5891   -1.3990   -0.2222 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8547   -1.6832   -1.9242 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5655   -1.3031   -2.5054 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9390    0.4540   -2.1765 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2010   -4.2709   -0.2490 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1393   -3.2672    0.7510 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7063   -2.6774   -0.8089 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1897   -5.3495   -2.5139 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5619   -4.8433   -2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1925   -3.7083   -4.0515 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6592   -6.2859   -0.4485 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2604   -4.6817    1.4124 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3547   -7.1309   -0.1314 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5737   -6.4549   -1.7379 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5519   -5.5807   -1.0848 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0180   -5.4096    0.6130 H   0  0  0  0  0  0  0  0  0  0  0  0
 12  9  1  0  0  0  0
  8  9  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 16  1  0  0  0  0
 17 16  1  0  0  0  0
 27 23  1  0  0  0  0
  9  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  8  1  0  0  0  0
 22 34  1  0  0  0  0
 31 32  1  0  0  0  0
 22 23  2  0  0  0  0
 27 28  1  1  0  0  0
 25 26  1  0  0  0  0
 17 18  2  0  0  0  0
 16 58  1  1  0  0  0
 16 14  1  0  0  0  0
 20 21  1  1  0  0  0
 20 19  1  0  0  0  0
  9 10  1  1  0  0  0
 19 18  1  0  0  0  0
  4  2  1  0  0  0  0
 20 14  1  0  0  0  0
  6  7  1  0  0  0  0
 33 31  1  0  0  0  0
  8 47  1  6  0  0  0
 33 34  1  0  0  0  0
 14 15  1  6  0  0  0
 31 27  1  0  0  0  0
 27 29  1  0  0  0  0
 22 17  1  0  0  0  0
 10 11  1  0  0  0  0
 20  8  1  0  0  0  0
  2  1  1  0  0  0  0
 14 13  1  0  0  0  0
  2  3  1  0  0  0  0
 13 12  1  0  0  0  0
 29 30  1  0  0  0  0
 33 77  1  0  0  0  0
 33 78  1  0  0  0  0
 31 75  1  1  0  0  0
 34 79  1  0  0  0  0
 34 80  1  0  0  0  0
 24 65  1  0  0  0  0
 24 66  1  0  0  0  0
 25 67  1  6  0  0  0
 19 60  1  0  0  0  0
 19 61  1  0  0  0  0
 18 59  1  0  0  0  0
 13 53  1  0  0  0  0
 13 54  1  0  0  0  0
 12 51  1  0  0  0  0
 12 52  1  0  0  0  0
  4 42  1  6  0  0  0
  5 43  1  0  0  0  0
  5 44  1  0  0  0  0
  6 45  1  1  0  0  0
 32 76  1  0  0  0  0
 28 69  1  0  0  0  0
 28 70  1  0  0  0  0
 28 71  1  0  0  0  0
 26 68  1  0  0  0  0
 21 62  1  0  0  0  0
 21 63  1  0  0  0  0
 21 64  1  0  0  0  0
 10 48  1  0  0  0  0
 10 49  1  0  0  0  0
  2 38  1  1  0  0  0
  7 46  1  0  0  0  0
 15 55  1  0  0  0  0
 15 56  1  0  0  0  0
 15 57  1  0  0  0  0
 29 72  1  0  0  0  0
 29 73  1  0  0  0  0
 11 50  1  0  0  0  0
  1 35  1  0  0  0  0
  1 36  1  0  0  0  0
  1 37  1  0  0  0  0
  3 39  1  0  0  0  0
  3 40  1  0  0  0  0
  3 41  1  0  0  0  0
 30 74  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0036791

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC([H])([H])[C@@]12C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@@]4([H])C(=C([H])C([H])([H])[C@]3(C([H])([H])[H])[C@@]1([H])[C@]([H])(O[H])C([H])([H])[C@@]2([H])C([H])(C([H])([H])[H])C([H])([H])[H])C1=C(C([H])([H])[C@]4([H])O[H])[C@](C([H])([H])[H])(C([H])([H])O[H])[C@@]([H])(O[H])C([H])([H])C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C29H46O5/c1-16(2)19-12-22(33)25-28(5)9-8-18-17-6-7-23(34)26(3,14-30)20(17)13-21(32)24(18)27(28,4)10-11-29(19,25)15-31/h8,16,19,21-25,30-34H,6-7,9-15H2,1-5H3/t19-,21-,22+,23-,24-,25+,26-,27-,28+,29+/m0/s1

> <INCHI_KEY>
NOVAZXBJXPYDOZ-LXMMOFSFSA-N

> <FORMULA>
C29H46O5

> <MOLECULAR_WEIGHT>
474.682

> <EXACT_MASS>
474.334524581

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
80

> <JCHEM_AVERAGE_POLARIZABILITY>
55.53990807594099

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1S,2S,5R,6S,8R,9R,10R,17S,18R,21S)-5,18-bis(hydroxymethyl)-2,10,18-trimethyl-6-(propan-2-yl)pentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicosa-12,14(19)-diene-8,17,21-triol

> <ALOGPS_LOGP>
2.55

> <JCHEM_LOGP>
1.4617564773333336

> <ALOGPS_LOGS>
-4.23

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.722710398810651

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.23579331438172

> <JCHEM_PKA_STRONGEST_BASIC>
-0.5341361710485878

> <JCHEM_POLAR_SURFACE_AREA>
101.15

> <JCHEM_REFRACTIVITY>
134.8235

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.83e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2S,5R,6S,8R,9R,10R,17S,18R,21S)-5,18-bis(hydroxymethyl)-6-isopropyl-2,10,18-trimethylpentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicosa-12,14(19)-diene-8,17,21-triol

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 80 84  0  0  0  0  0  0  0  0999 V2000
   -6.1282    3.5560    0.2817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6449    3.3376    0.6224 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.8276    4.4188   -0.0888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1961    1.8992    0.2512 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.0692    0.8104    0.9452 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1862   -0.4389    1.1066 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8400   -1.5745    0.5534 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9257   -0.0946    0.3128 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7215    1.4351    0.5414 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.2628    1.9143    1.9477 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0664    1.4241    3.0071 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6738    1.9072   -0.4869 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3744    1.0667   -0.4657 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5803   -0.4692   -0.6723 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0526   -0.6458   -2.1554 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7517   -1.3228   -0.4750 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4755   -2.8483   -0.4443 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7810   -3.3081   -0.2433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0003   -2.4603    0.0210 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6566   -0.9959    0.3904 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0927   -1.0350    1.8428 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.3954    2.9509   -0.3086 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1005    1.8855   -1.4968 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.5636   -2.9257    0.8402 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.8909   -1.0787    2.5885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4536   -0.1839    2.0739 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.9390    0.4540   -2.1765 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2010   -4.2709   -0.2490 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1393   -3.2672    0.7510 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7063   -2.6774   -0.8089 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1897   -5.3495   -2.5139 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5619   -4.8433   -2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1925   -3.7083   -4.0515 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6592   -6.2859   -0.4485 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2604   -4.6817    1.4124 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3547   -7.1309   -0.1314 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5737   -6.4549   -1.7379 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5519   -5.5807   -1.0848 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0180   -5.4096    0.6130 H   0  0  0  0  0  0  0  0  0  0  0  0
 12  9  1  0
  8  9  1  0
 23 24  1  0
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  1 35  1  0
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  3 40  1  0
  3 41  1  0
 30 74  1  0
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0      -6.128   3.556   0.282  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.645   3.338   0.622  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.828   4.419  -0.089  0.00  0.00           C+0
HETATM    4  C   UNK     0      -4.196   1.899   0.251  0.00  0.00           C+0
HETATM    5  C   UNK     0      -5.069   0.810   0.945  0.00  0.00           C+0
HETATM    6  C   UNK     0      -4.186  -0.439   1.107  0.00  0.00           C+0
HETATM    7  O   UNK     0      -4.840  -1.575   0.553  0.00  0.00           O+0
HETATM    8  C   UNK     0      -2.926  -0.095   0.313  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.721   1.435   0.541  0.00  0.00           C+0
HETATM   10  C   UNK     0      -2.263   1.914   1.948  0.00  0.00           C+0
HETATM   11  O   UNK     0      -3.066   1.424   3.007  0.00  0.00           O+0
HETATM   12  C   UNK     0      -1.674   1.907  -0.487  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.374   1.067  -0.466  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.580  -0.469  -0.672  0.00  0.00           C+0
HETATM   15  C   UNK     0      -1.053  -0.646  -2.155  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.752  -1.323  -0.475  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.476  -2.848  -0.444  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.781  -3.308  -0.243  0.00  0.00           C+0
HETATM   19  C   UNK     0      -2.000  -2.460   0.021  0.00  0.00           C+0
HETATM   20  C   UNK     0      -1.657  -0.996   0.390  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.093  -1.035   1.843  0.00  0.00           C+0
HETATM   22  C   UNK     0       1.631  -3.767  -0.613  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.878  -3.305  -0.881  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.129  -1.834  -1.119  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.880  -1.033  -1.490  0.00  0.00           C+0
HETATM   26  O   UNK     0       2.249   0.346  -1.499  0.00  0.00           O+0
HETATM   27  C   UNK     0       4.128  -4.223  -0.957  0.00  0.00           C+0
HETATM   28  C   UNK     0       5.358  -3.570  -0.279  0.00  0.00           C+0
HETATM   29  C   UNK     0       4.458  -4.536  -2.450  0.00  0.00           C+0
HETATM   30  O   UNK     0       5.018  -3.421  -3.139  0.00  0.00           O+0
HETATM   31  C   UNK     0       3.851  -5.578  -0.231  0.00  0.00           C+0
HETATM   32  O   UNK     0       3.836  -5.437   1.194  0.00  0.00           O+0
HETATM   33  C   UNK     0       2.535  -6.194  -0.674  0.00  0.00           C+0
HETATM   34  C   UNK     0       1.361  -5.254  -0.419  0.00  0.00           C+0
HETATM   35  H   UNK     0      -6.436   4.580   0.520  0.00  0.00           H+0
HETATM   36  H   UNK     0      -6.319   3.385  -0.783  0.00  0.00           H+0
HETATM   37  H   UNK     0      -6.776   2.887   0.856  0.00  0.00           H+0
HETATM   38  H   UNK     0      -4.542   3.487   1.704  0.00  0.00           H+0
HETATM   39  H   UNK     0      -4.266   5.410   0.071  0.00  0.00           H+0
HETATM   40  H   UNK     0      -3.786   4.241  -1.169  0.00  0.00           H+0
HETATM   41  H   UNK     0      -2.807   4.469   0.295  0.00  0.00           H+0
HETATM   42  H   UNK     0      -4.365   1.790  -0.832  0.00  0.00           H+0
HETATM   43  H   UNK     0      -5.966   0.603   0.350  0.00  0.00           H+0
HETATM   44  H   UNK     0      -5.408   1.145   1.933  0.00  0.00           H+0
HETATM   45  H   UNK     0      -3.989  -0.654   2.159  0.00  0.00           H+0
HETATM   46  H   UNK     0      -5.660  -1.702   1.062  0.00  0.00           H+0
HETATM   47  H   UNK     0      -3.258  -0.211  -0.730  0.00  0.00           H+0
HETATM   48  H   UNK     0      -2.289   3.007   2.001  0.00  0.00           H+0
HETATM   49  H   UNK     0      -1.228   1.650   2.162  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.696   1.781   3.833  0.00  0.00           H+0
HETATM   51  H   UNK     0      -1.395   2.951  -0.309  0.00  0.00           H+0
HETATM   52  H   UNK     0      -2.100   1.886  -1.497  0.00  0.00           H+0
HETATM   53  H   UNK     0       0.172   1.251   0.465  0.00  0.00           H+0
HETATM   54  H   UNK     0       0.254   1.477  -1.263  0.00  0.00           H+0
HETATM   55  H   UNK     0      -1.099  -1.694  -2.466  0.00  0.00           H+0
HETATM   56  H   UNK     0      -2.036  -0.213  -2.350  0.00  0.00           H+0
HETATM   57  H   UNK     0      -0.364  -0.145  -2.846  0.00  0.00           H+0
HETATM   58  H   UNK     0       1.157  -1.049   0.510  0.00  0.00           H+0
HETATM   59  H   UNK     0      -1.008  -4.370  -0.234  0.00  0.00           H+0
HETATM   60  H   UNK     0      -2.564  -2.926   0.840  0.00  0.00           H+0
HETATM   61  H   UNK     0      -2.647  -2.509  -0.864  0.00  0.00           H+0
HETATM   62  H   UNK     0      -0.472  -1.918   2.031  0.00  0.00           H+0
HETATM   63  H   UNK     0      -1.891  -1.079   2.588  0.00  0.00           H+0
HETATM   64  H   UNK     0      -0.454  -0.184   2.074  0.00  0.00           H+0
HETATM   65  H   UNK     0       3.589  -1.399  -0.222  0.00  0.00           H+0
HETATM   66  H   UNK     0       3.855  -1.683  -1.924  0.00  0.00           H+0
HETATM   67  H   UNK     0       1.565  -1.303  -2.505  0.00  0.00           H+0
HETATM   68  H   UNK     0       2.939   0.454  -2.176  0.00  0.00           H+0
HETATM   69  H   UNK     0       6.201  -4.271  -0.249  0.00  0.00           H+0
HETATM   70  H   UNK     0       5.139  -3.267   0.751  0.00  0.00           H+0
HETATM   71  H   UNK     0       5.706  -2.677  -0.809  0.00  0.00           H+0
HETATM   72  H   UNK     0       5.190  -5.349  -2.514  0.00  0.00           H+0
HETATM   73  H   UNK     0       3.562  -4.843  -3.000  0.00  0.00           H+0
HETATM   74  H   UNK     0       5.192  -3.708  -4.051  0.00  0.00           H+0
HETATM   75  H   UNK     0       4.659  -6.286  -0.449  0.00  0.00           H+0
HETATM   76  H   UNK     0       3.260  -4.682   1.412  0.00  0.00           H+0
HETATM   77  H   UNK     0       2.355  -7.131  -0.131  0.00  0.00           H+0
HETATM   78  H   UNK     0       2.574  -6.455  -1.738  0.00  0.00           H+0
HETATM   79  H   UNK     0       0.552  -5.581  -1.085  0.00  0.00           H+0
HETATM   80  H   UNK     0       1.018  -5.410   0.613  0.00  0.00           H+0
CONECT    1    2   35   36   37                                             
CONECT    2    4    1    3   38                                             
CONECT    3    2   39   40   41                                             
CONECT    4    9    5    2   42                                             
CONECT    5    4    6   43   44                                             
CONECT    6    5    8    7   45                                             
CONECT    7    6   46                                                       
CONECT    8    9    6   47   20                                             
CONECT    9   12    8    4   10                                             
CONECT   10    9   11   48   49                                             
CONECT   11   10   50                                                       
CONECT   12    9   13   51   52                                             
CONECT   13   14   12   53   54                                             
CONECT   14   16   20   15   13                                             
CONECT   15   14   55   56   57                                             
CONECT   16   25   17   58   14                                             
CONECT   17   16   18   22                                                  
CONECT   18   17   19   59                                                  
CONECT   19   20   18   60   61                                             
CONECT   20   21   19   14    8                                             
CONECT   21   20   62   63   64                                             
CONECT   22   34   23   17                                                  
CONECT   23   24   27   22                                                  
CONECT   24   23   25   65   66                                             
CONECT   25   24   16   26   67                                             
CONECT   26   25   68                                                       
CONECT   27   23   28   31   29                                             
CONECT   28   27   69   70   71                                             
CONECT   29   27   30   72   73                                             
CONECT   30   29   74                                                       
CONECT   31   32   33   27   75                                             
CONECT   32   31   76                                                       
CONECT   33   31   34   77   78                                             
CONECT   34   22   33   79   80                                             
CONECT   35    1                                                            
CONECT   36    1                                                            
CONECT   37    1                                                            
CONECT   38    2                                                            
CONECT   39    3                                                            
CONECT   40    3                                                            
CONECT   41    3                                                            
CONECT   42    4                                                            
CONECT   43    5                                                            
CONECT   44    5                                                            
CONECT   45    6                                                            
CONECT   46    7                                                            
CONECT   47    8                                                            
CONECT   48   10                                                            
CONECT   49   10                                                            
CONECT   50   11                                                            
CONECT   51   12                                                            
CONECT   52   12                                                            
CONECT   53   13                                                            
CONECT   54   13                                                            
CONECT   55   15                                                            
CONECT   56   15                                                            
CONECT   57   15                                                            
CONECT   58   16                                                            
CONECT   59   18                                                            
CONECT   60   19                                                            
CONECT   61   19                                                            
CONECT   62   21                                                            
CONECT   63   21                                                            
CONECT   64   21                                                            
CONECT   65   24                                                            
CONECT   66   24                                                            
CONECT   67   25                                                            
CONECT   68   26                                                            
CONECT   69   28                                                            
CONECT   70   28                                                            
CONECT   71   28                                                            
CONECT   72   29                                                            
CONECT   73   29                                                            
CONECT   74   30                                                            
CONECT   75   31                                                            
CONECT   76   32                                                            
CONECT   77   33                                                            
CONECT   78   33                                                            
CONECT   79   34                                                            
CONECT   80   34                                                            
MASTER        0    0    0    0    0    0    0    0   80    0  168    0
END

RDKit          3D

80 84  0  0  0  0  0  0  0  0999 V2000
   -6.1282    3.5560    0.2817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6449    3.3376    0.6224 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.8276    4.4188   -0.0888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1961    1.8992    0.2512 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.0692    0.8104    0.9452 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1862   -0.4389    1.1066 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8400   -1.5745    0.5534 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9257   -0.0946    0.3128 C   0  0  1  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₉H₄₆O₅

Average Mass

474.6820 Da

Monoisotopic Mass

474.33452 Da

IUPAC Name

(1S,2S,5R,6S,8R,9R,10R,17S,18R,21S)-5,18-bis(hydroxymethyl)-2,10,18-trimethyl-6-(propan-2-yl)pentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicosa-12,14(19)-diene-8,17,21-triol

Traditional Name

(1S,2S,5R,6S,8R,9R,10R,17S,18R,21S)-5,18-bis(hydroxymethyl)-6-isopropyl-2,10,18-trimethylpentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicosa-12,14(19)-diene-8,17,21-triol

CAS Registry Number

Not Available

SMILES

[H]OC([H])([H])[C@@]12C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@@]4([H])C(=C([H])C([H])([H])[C@]3(C([H])([H])[H])[C@@]1([H])[C@]([H])(O[H])C([H])([H])[C@@]2([H])C([H])(C([H])([H])[H])C([H])([H])[H])C1=C(C([H])([H])[C@]4([H])O[H])[C@](C([H])([H])[H])(C([H])([H])O[H])[C@@]([H])(O[H])C([H])([H])C1([H])[H]

InChI Identifier

InChI=1S/C29H46O5/c1-16(2)19-12-22(33)25-28(5)9-8-18-17-6-7-23(34)26(3,14-30)20(17)13-21(32)24(18)27(28,4)10-11-29(19,25)15-31/h8,16,19,21-25,30-34H,6-7,9-15H2,1-5H3/t19-,21-,22+,23-,24-,25+,26-,27-,28+,29+/m0/s1

InChI Key

NOVAZXBJXPYDOZ-LXMMOFSFSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, acetone-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Bambusa emeiensis	LOTUS Database	35616633
Sinocalamus affinis	JEOL database	Xiong, L., et al, J. Nat. Prod. 75, 1160 (2012)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.55	ALOGPS
logP	1.46	ChemAxon
logS	-4.2	ALOGPS
pKa (Strongest Acidic)	14.24	ChemAxon
pKa (Strongest Basic)	-0.53	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	101.15 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	134.82 m³·mol⁻¹	ChemAxon
Polarizability	55.54 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

28519947

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

60155761

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Xiong, L., et al. (2012). Xiong, L., et al, J. Nat. Prod. 75, 1160 (2012). J. Nat. Prod..

Showing NP-Card for (+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+ (NP0036791)

MOL for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

3D MOL for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

3D SDF for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

3D-SDF for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

PDB for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

3D PDB for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

SMILES for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

INCHI for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

Structure for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)

3D Structure for NP0036791 ((+)-(3S,4R,7S,8S,13R,14S,17R,18R,19R,21S)-25-norfern-5(10),9(11)-diene-3,+)