Np mrd loader

Record Information
Version1.0
Created at2021-06-19 23:45:21 UTC
Updated at2021-06-30 00:02:43 UTC
NP-MRD IDNP0033121
Secondary Accession NumbersNone
Natural Product Identification
Common Namehamigerol A
Provided ByJEOL DatabaseJEOL Logo
Description hamigerol A is found in Hamigera hamigera. It was first documented in 2007 (Cheng, J. -F., et al.).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC56H84Na4O20S4
Average Mass1297.4700 Da
Monoisotopic Mass1296.40296 Da
IUPAC Nametetrasodium (2S,4S,6R,7S,8S,11R,14R,15R)-14-[(2R)-4-[(1S,2S,4R,6S)-4-[(1S)-1-[(2S,4S,5R,6R,7R,8S,11S,14R,15R)-5-hydroxy-2,6,15-trimethyl-4,8-bis(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-1(10)-en-14-yl]ethyl]-1,7,7-trimethyl-3,8-dioxabicyclo[4.2.1]nonan-2-yl]butan-2-yl]-2,6,15-trimethyl-5-oxo-4-(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-1(10)-en-8-yl sulfate
Traditional Nametetrasodium (2S,4S,6R,7S,8S,11R,14R,15R)-14-[(2R)-4-[(1S,2S,4R,6S)-4-[(1S)-1-[(2S,4S,5R,6R,7R,8S,11S,14R,15R)-5-hydroxy-2,6,15-trimethyl-4,8-bis(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-1(10)-en-14-yl]ethyl]-1,7,7-trimethyl-3,8-dioxabicyclo[4.2.1]nonan-2-yl]butan-2-yl]-2,6,15-trimethyl-5-oxo-4-(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-1(10)-en-8-yl sulfate
CAS Registry NumberNot Available
SMILES
[Na+].[Na+].[Na+].[Na+].[H]O[C@@]1([H])[C@@]([H])(O[S]([O-])(=O)=O)C([H])([H])[C@@]2(C3=C(C([H])([H])[C@]([H])(O[S]([O-])(=O)=O)[C@]2([H])[C@@]1([H])C([H])([H])[H])[C@@]1([H])C([H])([H])C([H])([H])[C@]([H])([C@]([H])(C([H])([H])[H])[C@]2([H])O[C@@]([H])(C([H])([H])C([H])([H])[C@@]([H])(C([H])([H])[H])[C@@]4([H])C([H])([H])C([H])([H])[C@@]5([H])C6=C(C([H])([H])C([H])([H])[C@]45C([H])([H])[H])[C@@]4(C([H])([H])[H])C([H])([H])[C@]([H])(O[S]([O-])(=O)=O)C(=O)[C@]([H])(C([H])([H])[H])[C@]4([H])[C@@]([H])(O[S]([O-])(=O)=O)C6([H])[H])[C@]4(OC(C([H])([H])[H])(C([H])([H])[H])[C@]([H])(C4([H])[H])C2([H])[H])C([H])([H])[H])[C@@]1(C([H])([H])[H])C([H])([H])C3([H])[H])C([H])([H])[H]
InChI Identifier
InChI=1S/C56H88O20S4.4Na/c1-28(35-13-15-37-33-23-42(72-77(59,60)61)47-30(3)49(57)44(74-79(65,66)67)26-54(47,9)39(33)18-20-52(35,37)7)12-17-46-56(11)25-32(51(5,6)76-56)22-41(71-46)29(2)36-14-16-38-34-24-43(73-78(62,63)64)48-31(4)50(58)45(75-80(68,69)70)27-55(48,10)40(34)19-21-53(36,38)8;;;;/h28-32,35-38,41-48,50,58H,12-27H2,1-11H3,(H,59,60,61)(H,62,63,64)(H,65,66,67)(H,68,69,70);;;;/q;4*+1/p-4/t28-,29+,30-,31-,32+,35-,36-,37+,38-,41-,42+,43+,44+,45+,46+,47-,48+,50-,52-,53-,54-,55-,56+;;;;/m1..../s1
InChI KeyVKGWQBSINLTUPE-IYAWKVPESA-J
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Hamigera hamigeraJEOL database
    • Cheng, J. -F., et al, J. Nat. Prod. 70, 1195 (2007)
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.82ALOGPS
logP1.03ChemAxon
logS-5.6ALOGPS
pKa (Strongest Acidic)-2.3ChemAxon
pKa (Strongest Basic)-3.3ChemAxon
Physiological Charge-4ChemAxon
Hydrogen Acceptor Count16ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area321.48 ŲChemAxon
Rotatable Bond Count14ChemAxon
Refractivity287.83 m³·mol⁻¹ChemAxon
Polarizability124.53 ųChemAxon
Number of Rings10ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
External LinksNot Available
References
General References
  1. Cheng, J. -F., et al. (2007). Cheng, J. -F., et al, J. Nat. Prod. 70, 1195 (2007). J. Nat. Prod..