NP-MRD: Showing NP-Card for Hodgsonox (NP0025520)

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Record Information

Version

1.0

Created at

2021-06-19 17:37:27 UTC

Updated at

2021-06-29 23:50:32 UTC

NP-MRD ID

NP0025520

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Hodgsonox

Provided By

JEOL Database JEOL Logo

Description

Hodgsonox belongs to the class of organic compounds known as oxanes. Oxanes are compounds containing an oxane (tetrahydropyran) ring, which is a six-member saturated aliphatic heterocycle with one oxygen atom and five carbon atoms. Hodgsonox is found in Lepidolaena hodgsoniae and Lepidolaena hodgsoniae Grolle.. It was first documented in 2003 (PMID: 12657293). Based on a literature review a small amount of articles have been published on Hodgsonox (PMID: 15974603) (PMID: 15787532).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306192119373D          

 39 41  0  0  0  0            999 V2000
   -2.0610   -3.1101    2.9712 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8723   -2.9925    3.5815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0134   -1.7502    3.6733 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7203   -0.6401    3.0919 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1135    0.3355    2.4592 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7620    1.5235    2.0810 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8023   -0.2947    1.2418 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1646   -0.7852    0.1376 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5849   -1.9325   -0.5786 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3489   -2.9334   -1.2887 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4587   -3.9883   -2.0548 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3036   -2.2331   -2.2608 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3811   -2.5525    0.5452 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6299   -1.9159    0.8217 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5158   -1.5597    1.6595 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3614   -2.0028    3.0547 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3698   -2.5092    3.7901 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5968   -4.0536    2.9708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5257   -2.2687    2.4661 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4676   -3.8723    4.0780 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1089   -1.5048    4.7360 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8609    0.6814    3.1859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6050    1.2198    1.4514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1852    2.2914    1.5569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1976    1.9708    2.9813 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5196    0.4159    0.8113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0927   -1.1673    0.5792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4304    0.0230   -0.5515 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2787   -1.4977   -1.3111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9542   -3.4567   -0.5368 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0900   -3.5243   -2.8205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2083   -4.6996   -2.5539 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1061   -4.5633   -1.3859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9216   -2.9643   -2.7932 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9849   -1.5572   -1.7348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7522   -1.6502   -3.0063 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2451   -3.6005    0.7563 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2365   -2.7936    4.8286 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3560   -2.6515    3.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
 16 17  2  3  0  0  0
  7 15  1  0  0  0  0
  7 26  1  6  0  0  0
 15 14  1  1  0  0  0
 13 14  1  0  0  0  0
 15 16  1  0  0  0  0
  3 21  1  1  0  0  0
  7  5  1  0  0  0  0
  9 29  1  6  0  0  0
  5  4  1  0  0  0  0
  9 10  1  0  0  0  0
  4  3  1  0  0  0  0
  5  6  1  0  0  0  0
 15 13  1  0  0  0  0
  3  2  1  0  0  0  0
 13  9  1  0  0  0  0
  2  1  2  3  0  0  0
  9  8  1  0  0  0  0
 10 11  1  0  0  0  0
  8  7  1  0  0  0  0
 10 12  1  0  0  0  0
  3 16  1  0  0  0  0
  5 22  1  1  0  0  0
 13 37  1  1  0  0  0
  8 27  1  0  0  0  0
  8 28  1  0  0  0  0
 17 38  1  0  0  0  0
 17 39  1  0  0  0  0
 10 30  1  1  0  0  0
  6 23  1  0  0  0  0
  6 24  1  0  0  0  0
  6 25  1  0  0  0  0
  2 20  1  0  0  0  0
  1 18  1  0  0  0  0
  1 19  1  0  0  0  0
 11 31  1  0  0  0  0
 11 32  1  0  0  0  0
 11 33  1  0  0  0  0
 12 34  1  0  0  0  0
 12 35  1  0  0  0  0
 12 36  1  0  0  0  0
M  END

     RDKit          3D

 39 41  0  0  0  0  0  0  0  0999 V2000
   -2.0610   -3.1101    2.9712 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8723   -2.9925    3.5815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0134   -1.7502    3.6733 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7203   -0.6401    3.0919 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1135    0.3355    2.4592 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7620    1.5235    2.0810 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8023   -0.2947    1.2418 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1646   -0.7852    0.1376 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5849   -1.9325   -0.5786 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3489   -2.9334   -1.2887 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4587   -3.9883   -2.0548 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3036   -2.2331   -2.2608 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3811   -2.5525    0.5452 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6299   -1.9159    0.8217 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5158   -1.5597    1.6595 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3614   -2.0028    3.0547 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3698   -2.5092    3.7901 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5968   -4.0536    2.9708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5257   -2.2687    2.4661 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4676   -3.8723    4.0780 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1089   -1.5048    4.7360 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8609    0.6814    3.1859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6050    1.2198    1.4514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1852    2.2914    1.5569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1976    1.9708    2.9813 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5196    0.4159    0.8113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0927   -1.1673    0.5792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4304    0.0230   -0.5515 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2787   -1.4977   -1.3111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9542   -3.4567   -0.5368 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0900   -3.5243   -2.8205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2083   -4.6996   -2.5539 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1061   -4.5633   -1.3859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9216   -2.9643   -2.7932 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9849   -1.5572   -1.7348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7522   -1.6502   -3.0063 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2451   -3.6005    0.7563 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2365   -2.7936    4.8286 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3560   -2.6515    3.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
 16 17  2  3
  7 15  1  0
  7 26  1  6
 15 14  1  1
 13 14  1  0
 15 16  1  0
  3 21  1  1
  7  5  1  0
  9 29  1  6
  5  4  1  0
  9 10  1  0
  4  3  1  0
  5  6  1  0
 15 13  1  0
  3  2  1  0
 13  9  1  0
  2  1  2  3
  9  8  1  0
 10 11  1  0
  8  7  1  0
 10 12  1  0
  3 16  1  0
  5 22  1  1
 13 37  1  1
  8 27  1  0
  8 28  1  0
 17 38  1  0
 17 39  1  0
 10 30  1  1
  6 23  1  0
  6 24  1  0
  6 25  1  0
  2 20  1  0
  1 18  1  0
  1 19  1  0
 11 31  1  0
 11 32  1  0
 11 33  1  0
 12 34  1  0
 12 35  1  0
 12 36  1  0
M  END


  Mrv1652306192119373D          

 39 41  0  0  0  0            999 V2000
   -2.0610   -3.1101    2.9712 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8723   -2.9925    3.5815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0134   -1.7502    3.6733 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7203   -0.6401    3.0919 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1135    0.3355    2.4592 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7620    1.5235    2.0810 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8023   -0.2947    1.2418 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1646   -0.7852    0.1376 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5849   -1.9325   -0.5786 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3489   -2.9334   -1.2887 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4587   -3.9883   -2.0548 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3036   -2.2331   -2.2608 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3811   -2.5525    0.5452 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6299   -1.9159    0.8217 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5158   -1.5597    1.6595 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3614   -2.0028    3.0547 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3698   -2.5092    3.7901 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5968   -4.0536    2.9708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5257   -2.2687    2.4661 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4676   -3.8723    4.0780 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1089   -1.5048    4.7360 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8609    0.6814    3.1859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6050    1.2198    1.4514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1852    2.2914    1.5569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1976    1.9708    2.9813 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5196    0.4159    0.8113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0927   -1.1673    0.5792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4304    0.0230   -0.5515 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2787   -1.4977   -1.3111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9542   -3.4567   -0.5368 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0900   -3.5243   -2.8205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2083   -4.6996   -2.5539 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1061   -4.5633   -1.3859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9216   -2.9643   -2.7932 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9849   -1.5572   -1.7348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7522   -1.6502   -3.0063 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2451   -3.6005    0.7563 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2365   -2.7936    4.8286 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3560   -2.6515    3.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
 16 17  2  3  0  0  0
  7 15  1  0  0  0  0
  7 26  1  6  0  0  0
 15 14  1  1  0  0  0
 13 14  1  0  0  0  0
 15 16  1  0  0  0  0
  3 21  1  1  0  0  0
  7  5  1  0  0  0  0
  9 29  1  6  0  0  0
  5  4  1  0  0  0  0
  9 10  1  0  0  0  0
  4  3  1  0  0  0  0
  5  6  1  0  0  0  0
 15 13  1  0  0  0  0
  3  2  1  0  0  0  0
 13  9  1  0  0  0  0
  2  1  2  3  0  0  0
  9  8  1  0  0  0  0
 10 11  1  0  0  0  0
  8  7  1  0  0  0  0
 10 12  1  0  0  0  0
  3 16  1  0  0  0  0
  5 22  1  1  0  0  0
 13 37  1  1  0  0  0
  8 27  1  0  0  0  0
  8 28  1  0  0  0  0
 17 38  1  0  0  0  0
 17 39  1  0  0  0  0
 10 30  1  1  0  0  0
  6 23  1  0  0  0  0
  6 24  1  0  0  0  0
  6 25  1  0  0  0  0
  2 20  1  0  0  0  0
  1 18  1  0  0  0  0
  1 19  1  0  0  0  0
 11 31  1  0  0  0  0
 11 32  1  0  0  0  0
 11 33  1  0  0  0  0
 12 34  1  0  0  0  0
 12 35  1  0  0  0  0
 12 36  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0025520

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]C([H])=C([H])[C@]1([H])O[C@]([H])(C([H])([H])[H])[C@]2([H])C([H])([H])[C@]([H])(C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]3([H])O[C@@]23C1=C([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C15H22O2/c1-6-13-9(4)15-12(10(5)16-13)7-11(8(2)3)14(15)17-15/h6,8,10-14H,1,4,7H2,2-3,5H3/t10-,11-,12+,13+,14-,15+/m1/s1

> <INCHI_KEY>
ZEPRHZPADLESTJ-YRKSKIDTSA-N

> <FORMULA>
C15H22O2

> <MOLECULAR_WEIGHT>
234.339

> <EXACT_MASS>
234.161979948

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
39

> <JCHEM_AVERAGE_POLARIZABILITY>
26.94599096698937

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,3R,4R,6S,7R,9S)-9-ethenyl-7-methyl-10-methylidene-4-(propan-2-yl)-2,8-dioxatricyclo[4.4.0.0^{1,3}]decane

> <ALOGPS_LOGP>
2.79

> <JCHEM_LOGP>
2.976240429999999

> <ALOGPS_LOGS>
-3.70

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-3.9429057046323517

> <JCHEM_POLAR_SURFACE_AREA>
21.759999999999998

> <JCHEM_REFRACTIVITY>
67.2992

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.63e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,3R,4R,6S,7R,9S)-9-ethenyl-4-isopropyl-7-methyl-10-methylidene-2,8-dioxatricyclo[4.4.0.0^{1,3}]decane

> <JCHEM_VEBER_RULE>
1

$$$$

     RDKit          3D

 39 41  0  0  0  0  0  0  0  0999 V2000
   -2.0610   -3.1101    2.9712 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8723   -2.9925    3.5815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0134   -1.7502    3.6733 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7203   -0.6401    3.0919 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1135    0.3355    2.4592 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7620    1.5235    2.0810 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8023   -0.2947    1.2418 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1646   -0.7852    0.1376 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5849   -1.9325   -0.5786 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3489   -2.9334   -1.2887 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4587   -3.9883   -2.0548 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3036   -2.2331   -2.2608 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3811   -2.5525    0.5452 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6299   -1.9159    0.8217 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5158   -1.5597    1.6595 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3614   -2.0028    3.0547 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3698   -2.5092    3.7901 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5968   -4.0536    2.9708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5257   -2.2687    2.4661 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4676   -3.8723    4.0780 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1089   -1.5048    4.7360 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8609    0.6814    3.1859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6050    1.2198    1.4514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1852    2.2914    1.5569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1976    1.9708    2.9813 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5196    0.4159    0.8113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0927   -1.1673    0.5792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4304    0.0230   -0.5515 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2787   -1.4977   -1.3111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9542   -3.4567   -0.5368 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0900   -3.5243   -2.8205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2083   -4.6996   -2.5539 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1061   -4.5633   -1.3859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9216   -2.9643   -2.7932 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9849   -1.5572   -1.7348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7522   -1.6502   -3.0063 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2451   -3.6005    0.7563 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2365   -2.7936    4.8286 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3560   -2.6515    3.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
 16 17  2  3
  7 15  1  0
  7 26  1  6
 15 14  1  1
 13 14  1  0
 15 16  1  0
  3 21  1  1
  7  5  1  0
  9 29  1  6
  5  4  1  0
  9 10  1  0
  4  3  1  0
  5  6  1  0
 15 13  1  0
  3  2  1  0
 13  9  1  0
  2  1  2  3
  9  8  1  0
 10 11  1  0
  8  7  1  0
 10 12  1  0
  3 16  1  0
  5 22  1  1
 13 37  1  1
  8 27  1  0
  8 28  1  0
 17 38  1  0
 17 39  1  0
 10 30  1  1
  6 23  1  0
  6 24  1  0
  6 25  1  0
  2 20  1  0
  1 18  1  0
  1 19  1  0
 11 31  1  0
 11 32  1  0
 11 33  1  0
 12 34  1  0
 12 35  1  0
 12 36  1  0
M  END

HEADER    PROTEIN                                 19-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-JUN-21         0                                  
HETATM    1  C   UNK     0      -2.061  -3.110   2.971  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.872  -2.993   3.582  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.013  -1.750   3.673  0.00  0.00           C+0
HETATM    4  O   UNK     0      -0.720  -0.640   3.092  0.00  0.00           O+0
HETATM    5  C   UNK     0       0.114   0.336   2.459  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.762   1.524   2.081  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.802  -0.295   1.242  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.165  -0.785   0.138  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.585  -1.933  -0.579  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.349  -2.933  -1.289  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.459  -3.988  -2.055  0.00  0.00           C+0
HETATM   12  C   UNK     0      -1.304  -2.233  -2.261  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.381  -2.553   0.545  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.630  -1.916   0.822  0.00  0.00           O+0
HETATM   15  C   UNK     0       1.516  -1.560   1.660  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.361  -2.003   3.055  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.370  -2.509   3.790  0.00  0.00           C+0
HETATM   18  H   UNK     0      -2.597  -4.054   2.971  0.00  0.00           H+0
HETATM   19  H   UNK     0      -2.526  -2.269   2.466  0.00  0.00           H+0
HETATM   20  H   UNK     0      -0.468  -3.872   4.078  0.00  0.00           H+0
HETATM   21  H   UNK     0       0.109  -1.505   4.736  0.00  0.00           H+0
HETATM   22  H   UNK     0       0.861   0.681   3.186  0.00  0.00           H+0
HETATM   23  H   UNK     0      -1.605   1.220   1.451  0.00  0.00           H+0
HETATM   24  H   UNK     0      -0.185   2.291   1.557  0.00  0.00           H+0
HETATM   25  H   UNK     0      -1.198   1.971   2.981  0.00  0.00           H+0
HETATM   26  H   UNK     0       1.520   0.416   0.811  0.00  0.00           H+0
HETATM   27  H   UNK     0      -1.093  -1.167   0.579  0.00  0.00           H+0
HETATM   28  H   UNK     0      -0.430   0.023  -0.552  0.00  0.00           H+0
HETATM   29  H   UNK     0       1.279  -1.498  -1.311  0.00  0.00           H+0
HETATM   30  H   UNK     0      -0.954  -3.457  -0.537  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.090  -3.524  -2.821  0.00  0.00           H+0
HETATM   32  H   UNK     0      -0.208  -4.700  -2.554  0.00  0.00           H+0
HETATM   33  H   UNK     0       1.106  -4.563  -1.386  0.00  0.00           H+0
HETATM   34  H   UNK     0      -1.922  -2.964  -2.793  0.00  0.00           H+0
HETATM   35  H   UNK     0      -1.985  -1.557  -1.735  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.752  -1.650  -3.006  0.00  0.00           H+0
HETATM   37  H   UNK     0       1.245  -3.600   0.756  0.00  0.00           H+0
HETATM   38  H   UNK     0       2.236  -2.794   4.829  0.00  0.00           H+0
HETATM   39  H   UNK     0       3.356  -2.652   3.357  0.00  0.00           H+0
CONECT    1    2   18   19                                                  
CONECT    2    3    1   20                                                  
CONECT    3   21    4    2   16                                             
CONECT    4    5    3                                                       
CONECT    5    7    4    6   22                                             
CONECT    6    5   23   24   25                                             
CONECT    7   15   26    5    8                                             
CONECT    8    9    7   27   28                                             
CONECT    9   29   10   13    8                                             
CONECT   10    9   11   12   30                                             
CONECT   11   10   31   32   33                                             
CONECT   12   10   34   35   36                                             
CONECT   13   14   15    9   37                                             
CONECT   14   15   13                                                       
CONECT   15    7   14   16   13                                             
CONECT   16   17   15    3                                                  
CONECT   17   16   38   39                                                  
CONECT   18    1                                                            
CONECT   19    1                                                            
CONECT   20    2                                                            
CONECT   21    3                                                            
CONECT   22    5                                                            
CONECT   23    6                                                            
CONECT   24    6                                                            
CONECT   25    6                                                            
CONECT   26    7                                                            
CONECT   27    8                                                            
CONECT   28    8                                                            
CONECT   29    9                                                            
CONECT   30   10                                                            
CONECT   31   11                                                            
CONECT   32   11                                                            
CONECT   33   11                                                            
CONECT   34   12                                                            
CONECT   35   12                                                            
CONECT   36   12                                                            
CONECT   37   13                                                            
CONECT   38   17                                                            
CONECT   39   17                                                            
MASTER        0    0    0    0    0    0    0    0   39    0   82    0
END

RDKit          3D

39 41  0  0  0  0  0  0  0  0999 V2000
   -2.0610   -3.1101    2.9712 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8723   -2.9925    3.5815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0134   -1.7502    3.6733 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7203   -0.6401    3.0919 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1135    0.3355    2.4592 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7620    1.5235    2.0810 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8023   -0.2947    1.2418 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1646   -0.7852    0.1376 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5849   -1.9325   -0.5786 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3489   -2.9334   -1.2887 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4587   -3.9883   -2.0548 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3036   -2.2331   -2.2608 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3811   -2.5525    0.5452 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6299   -1.9159    0.8217 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5158   -1.5597    1.6595 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3614   -2.0028    3.0547 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3698   -2.5092    3.7901 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5968   -4.0536    2.9708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5257   -2.2687    2.4661 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4676   -3.8723    4.0780 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1089   -1.5048    4.7360 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8609    0.6814    3.1859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6050    1.2198    1.4514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1852    2.2914    1.5569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1976    1.9708    2.9813 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5196    0.4159    0.8113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0927   -1.1673    0.5792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4304    0.0230   -0.5515 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2787   -1.4977   -1.3111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9542   -3.4567   -0.5368 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0900   -3.5243   -2.8205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2083   -4.6996   -2.5539 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1061   -4.5633   -1.3859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9216   -2.9643   -2.7932 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9849   -1.5572   -1.7348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7522   -1.6502   -3.0063 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2451   -3.6005    0.7563 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2365   -2.7936    4.8286 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3560   -2.6515    3.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
 16 17  2  3
  7 15  1  0
  7 26  1  6
 15 14  1  1
 13 14  1  0
 15 16  1  0
  3 21  1  1
  7  5  1  0
  9 29  1  6
  5  4  1  0
  9 10  1  0
  4  3  1  0
  5  6  1  0
 15 13  1  0
  3  2  1  0
 13  9  1  0
  2  1  2  3
  9  8  1  0
 10 11  1  0
  8  7  1  0
 10 12  1  0
  3 16  1  0
  5 22  1  1
 13 37  1  1
  8 27  1  0
  8 28  1  0
 17 38  1  0
 17 39  1  0
 10 30  1  1
  6 23  1  0
  6 24  1  0
  6 25  1  0
  2 20  1  0
  1 18  1  0
  1 19  1  0
 11 31  1  0
 11 32  1  0
 11 33  1  0
 12 34  1  0
 12 35  1  0
 12 36  1  0
M  END

View in JSmol View DFT Assignments 3D Conformers

Synonyms

Not Available

Chemical Formula

C₁₅H₂₂O₂

Average Mass

234.3390 Da

Monoisotopic Mass

234.16198 Da

IUPAC Name

(1R,3R,4R,6S,7R,9S)-9-ethenyl-7-methyl-10-methylidene-4-(propan-2-yl)-2,8-dioxatricyclo[4.4.0.0^{1,3}]decane

Traditional Name

(1R,3R,4R,6S,7R,9S)-9-ethenyl-4-isopropyl-7-methyl-10-methylidene-2,8-dioxatricyclo[4.4.0.0^{1,3}]decane

CAS Registry Number

Not Available

SMILES

[H]C([H])=C([H])[C@]1([H])O[C@]([H])(C([H])([H])[H])[C@]2([H])C([H])([H])[C@]([H])(C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]3([H])O[C@@]23C1=C([H])[H]

InChI Identifier

InChI=1S/C15H22O2/c1-6-13-9(4)15-12(10(5)16-13)7-11(8(2)3)14(15)17-15/h6,8,10-14H,1,4,7H2,2-3,5H3/t10-,11-,12+,13+,14-,15+/m1/s1

InChI Key

ZEPRHZPADLESTJ-YRKSKIDTSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Lepidogyna hodgsoniae	JEOL database	Ainge, G. D., et al, J. Org. Chem. 66, 2818 (2001)
Lepidolaena hodgsoniae Grolle.	-	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as oxanes. Oxanes are compounds containing an oxane (tetrahydropyran) ring, which is a six-member saturated aliphatic heterocycle with one oxygen atom and five carbon atoms.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Oxanes

Sub Class

Not Available

Direct Parent

Oxanes

Alternative Parents

Substituents

Oxane
Oxacycle
Ether
Oxirane
Dialkyl ether
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.79	ALOGPS
logP	2.98	ChemAxon
logS	-3.7	ALOGPS
pKa (Strongest Basic)	-3.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	21.76 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	67.3 m³·mol⁻¹	ChemAxon
Polarizability	26.95 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00042588

Chemspider ID

8737076

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10561688

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Barlow AJ, Compton BJ, Hertewich U, Lorimer SD, Weavers RT: Sesquiterpenes from the New Zealand Liverwort Lepidolaena hodgsoniae. J Nat Prod. 2005 Jun;68(6):825-31. doi: 10.1021/np050058x. [PubMed:15974603 ]
Barlow AJ, Compton BJ, Weavers RT: Synthesis of the 3-methylene-2-vinyltetrahydropyran unit; the hallmark of the sesquiterpene, hodgsonox. J Org Chem. 2005 Apr 1;70(7):2470-5. doi: 10.1021/jo047998r. [PubMed:15787532 ]
Barlow AJ, Lorimer SD, Morgan ER, Weavers RT: Biosynthesis of the sesquiterpene hodgsonox from the New Zealand liverwort Lepidolaena hodgsoniae. Phytochemistry. 2003 May;63(1):25-9. doi: 10.1016/s0031-9422(02)00725-2. [PubMed:12657293 ]
Ainge, G. D., et al. (2001). Ainge, G. D., et al, J. Org. Chem. 66, 2818 (2001). J. Org. Chem..

Showing NP-Card for Hodgsonox (NP0025520)

MOL for NP0025520 (Hodgsonox)

3D MOL for NP0025520 (Hodgsonox)

3D SDF for NP0025520 (Hodgsonox)

3D-SDF for NP0025520 (Hodgsonox)

PDB for NP0025520 (Hodgsonox)

3D PDB for NP0025520 (Hodgsonox)

SMILES for NP0025520 (Hodgsonox)

INCHI for NP0025520 (Hodgsonox)

Structure for NP0025520 (Hodgsonox)

3D Structure for NP0025520 (Hodgsonox)