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Record Information
Version1.0
Created at2021-01-06 08:25:32 UTC
Updated at2021-07-15 17:41:27 UTC
NP-MRD IDNP0023327
Secondary Accession NumbersNone
Natural Product Identification
Common NamePiscicocin V1a
Provided ByNPAtlasNPAtlas Logo
Description Piscicocin V1a is found in Carnobacterium and Carnobacterium maltaromaticum. It was first documented in 1996 (PMID: 8953713). Based on a literature review very few articles have been published on Piscicocin V1a.
Structure
Thumb
Synonyms
ValueSource
2-[(2-{[2-({2-[(2,6-diamino-1-hydroxyhexylidene)amino]-1-hydroxy-3-(4-hydroxyphenyl)propylidene}amino)-1-hydroxy-3-(4-hydroxyphenyl)propylidene]amino}-1-hydroxyethylidene)amino]-N-({[1-({2-hydroxy-1-[(1-{[1-(C-hydroxycarbonimidoyl)-3-oxopropan-2-yl]-C-hydroxycarbonimidoyl}-2-sulfanylethyl)-C-hydroxycarbonimidoyl]ethyl}-C-hydroxycarbonimidoyl)-2-methylpropyl]-C-hydroxycarbonimidoyl}methyl)butanediimidateGenerator
2-[(2-{[2-({2-[(2,6-diamino-1-hydroxyhexylidene)amino]-1-hydroxy-3-(4-hydroxyphenyl)propylidene}amino)-1-hydroxy-3-(4-hydroxyphenyl)propylidene]amino}-1-hydroxyethylidene)amino]-N-({[1-({2-hydroxy-1-[(1-{[1-(C-hydroxycarbonimidoyl)-3-oxopropan-2-yl]-C-hydroxycarbonimidoyl}-2-sulphanylethyl)-C-hydroxycarbonimidoyl]ethyl}-C-hydroxycarbonimidoyl)-2-methylpropyl]-C-hydroxycarbonimidoyl}methyl)butanediimidateGenerator
2-[(2-{[2-({2-[(2,6-diamino-1-hydroxyhexylidene)amino]-1-hydroxy-3-(4-hydroxyphenyl)propylidene}amino)-1-hydroxy-3-(4-hydroxyphenyl)propylidene]amino}-1-hydroxyethylidene)amino]-N-({[1-({2-hydroxy-1-[(1-{[1-(C-hydroxycarbonimidoyl)-3-oxopropan-2-yl]-C-hydroxycarbonimidoyl}-2-sulphanylethyl)-C-hydroxycarbonimidoyl]ethyl}-C-hydroxycarbonimidoyl)-2-methylpropyl]-C-hydroxycarbonimidoyl}methyl)butanediimidic acidGenerator
Chemical FormulaC47H69N13O15S
Average Mass1088.2100 Da
Monoisotopic Mass1087.47568 Da
IUPAC NameN-({[(1R)-1-{[(1R)-1-{[(1S)-1-{[(2S)-1-carbamoyl-3-oxopropan-2-yl]carbamoyl}-2-sulfanylethyl]carbamoyl}-2-hydroxyethyl]carbamoyl}-2-methylpropyl]carbamoyl}methyl)-2-{2-[(2S)-2-{2-[(2S)-2,6-diaminohexanamido]-3-(4-hydroxyphenyl)propanamido}-3-(4-hydroxyphenyl)propanamido]acetamido}butanediamide
Traditional NameN-({[(1R)-1-{[(1R)-1-{[(1S)-1-{[(2S)-1-carbamoyl-3-oxopropan-2-yl]carbamoyl}-2-sulfanylethyl]carbamoyl}-2-hydroxyethyl]carbamoyl}-2-methylpropyl]carbamoyl}methyl)-2-{2-[(2S)-2-{2-[(2S)-2,6-diaminohexanamido]-3-(4-hydroxyphenyl)propanamido}-3-(4-hydroxyphenyl)propanamido]acetamido}succinamide
CAS Registry NumberNot Available
SMILES
CC(C)C(NC(=O)CNC(=O)C(CC(N)=O)NC(=O)CNC(=O)C(CC1=CC=C(O)C=C1)NC(=O)C(CC1=CC=C(O)C=C1)NC(=O)C(N)CCCCN)C(=O)NC(CO)C(=O)NC(CS)C(=O)NC(CC(N)=O)C=O
InChI Identifier
InChI=1S/C47H69N13O15S/c1-24(2)40(47(75)58-34(22-62)45(73)59-35(23-76)46(74)54-27(21-61)17-36(50)65)60-39(68)20-53-43(71)33(18-37(51)66)55-38(67)19-52-42(70)31(15-25-6-10-28(63)11-7-25)57-44(72)32(16-26-8-12-29(64)13-9-26)56-41(69)30(49)5-3-4-14-48/h6-13,21,24,27,30-35,40,62-64,76H,3-5,14-20,22-23,48-49H2,1-2H3,(H2,50,65)(H2,51,66)(H,52,70)(H,53,71)(H,54,74)(H,55,67)(H,56,69)(H,57,72)(H,58,75)(H,59,73)(H,60,68)
InChI KeyDXSXQNCOTGEZIS-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
CarnobacteriumNPAtlas
Carnobacterium maltaromaticumLOTUS Database
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-0.75ALOGPS
logP-8.1ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)9.13ChemAxon
pKa (Strongest Basic)10.48ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count17ChemAxon
Hydrogen Donor Count17ChemAxon
Polar Surface Area477.88 ŲChemAxon
Rotatable Bond Count34ChemAxon
Refractivity270.75 m³·mol⁻¹ChemAxon
Polarizability111.37 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA007439
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78444074
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139585178
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Bhugaloo-Vial P, Dousset X, Metivier A, Sorokine O, Anglade P, Boyaval P, Marion D: Purification and amino acid sequences of piscicocins V1a and V1b, two class IIa bacteriocins secreted by Carnobacterium piscicola V1 that display significantly different levels of specific inhibitory activity. Appl Environ Microbiol. 1996 Dec;62(12):4410-6. doi: 10.1128/AEM.62.12.4410-4416.1996. [PubMed:8953713 ]