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Record Information
Version1.0
Created at2021-01-06 08:02:48 UTC
Updated at2021-07-15 17:40:15 UTC
NP-MRD IDNP0022887
Secondary Accession NumbersNone
Natural Product Identification
Common NameTrehalose-6,6'-dicorynomycolate
Provided ByNPAtlasNPAtlas Logo
DescriptionTDCM is also known as DCYMT or S-TDCM. Trehalose-6,6'-dicorynomycolate is found in Corynebacterium matruchotii. It was first documented in 1993 (PMID: 8358747). Based on a literature review very few articles have been published on TDCM.
Structure
Thumb
Synonyms
ValueSource
6,6'-Di-O-tetradecyl-3-hydroxyoctadecanoyl-alpha,alpha trehaloseMeSH
6,6'-Dicorynomycolyl alpha, alpha'-trehaloseMeSH
6,6'-Dicorynomycolyl beta, beta'-trehaloseMeSH
6,6'-Dicorynomycolyl trehaloseMeSH
DCYMTMeSH
S-TDCMMeSH
Trehalose 6,6'-dicorynomycolateMeSH
Trehalose dicorynomycolateMeSH
[(2R,3S,4S,5R,6R)-3,4,5-Trihydroxy-6-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3R)-3-hydroxy-2-tetradecyloctadecanoyl]oxy}methyl)oxan-2-yl]oxy}oxan-2-yl]methyl (2R,3R)-3-hydroxy-2-tetradecyloctadecanoic acidGenerator
Chemical FormulaC76H146O15
Average Mass1299.9890 Da
Monoisotopic Mass1299.06617 Da
IUPAC Name[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3R)-3-hydroxy-2-tetradecyloctadecanoyl]oxy}methyl)oxan-2-yl]oxy}oxan-2-yl]methyl (2R,3R)-3-hydroxy-2-tetradecyloctadecanoate
Traditional Name[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2R,3R)-3-hydroxy-2-tetradecyloctadecanoyl]oxy}methyl)oxan-2-yl]oxy}oxan-2-yl]methyl (2R,3R)-3-hydroxy-2-tetradecyloctadecanoate
CAS Registry NumberNot Available
SMILES
CCCCCCCCCCCCCCC[C@@H](O)[C@@H](CCCCCCCCCCCCCC)C(=O)OC[C@H]1O[C@H](O[C@H]2O[C@H](COC(=O)[C@H](CCCCCCCCCCCCCC)[C@H](O)CCCCCCCCCCCCCCC)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@@H]1O
InChI Identifier
InChI=1S/C76H146O15/c1-5-9-13-17-21-25-29-33-37-41-45-49-53-57-63(77)61(55-51-47-43-39-35-31-27-23-19-15-11-7-3)73(85)87-59-65-67(79)69(81)71(83)75(89-65)91-76-72(84)70(82)68(80)66(90-76)60-88-74(86)62(56-52-48-44-40-36-32-28-24-20-16-12-8-4)64(78)58-54-50-46-42-38-34-30-26-22-18-14-10-6-2/h61-72,75-84H,5-60H2,1-4H3/t61-,62-,63-,64-,65-,66-,67-,68-,69+,70+,71-,72-,75-,76-/m1/s1
InChI KeyLFRXCNXVZHVRSE-JEZACWOJSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Corynebacterium matruchotiiNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP21.1ChemAxon
pKa (Strongest Acidic)11.91ChemAxon
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count13ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area242.13 ŲChemAxon
Rotatable Bond Count66ChemAxon
Refractivity365.73 m³·mol⁻¹ChemAxon
Polarizability156.66 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA004786
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00012037
Chemspider ID147135
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound168207
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Datta AK, Takayama K: Isolation and purification of trehalose 6-mono- and 6,6'-di-corynomycolates from Corynebacterium matruchotii. Structural characterization by 1H NMR. Carbohydr Res. 1993 Jul 5;245(1):151-8. doi: 10.1016/0008-6215(93)80068-p. [PubMed:8358747 ]