Np mrd loader

Record Information
Version1.0
Created at2021-01-06 06:12:43 UTC
Updated at2021-07-15 17:34:49 UTC
NP-MRD IDNP0020870
Secondary Accession NumbersNone
Natural Product Identification
Common NameTrikoramide A
Provided ByNPAtlasNPAtlas Logo
Description Trikoramide A is found in Symploca hydnoides. It was first documented in 2019 (PMID: 31763840). Based on a literature review very few articles have been published on Trikoramide A.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC68H97N11O10
Average Mass1228.5910 Da
Monoisotopic Mass1227.74199 Da
IUPAC Name(3S,9S,12S,18S,21S,27S,30S,36S,39S,42S,44S,52S)-36-benzyl-44-(3-methylbut-2-en-1-yl)-18,27,39-tris(2-methylpropyl)-9-(propan-2-yl)-1,7,10,16,19,25,28,34,37,40,51-undecaazaoctacyclo[40.10.0.0^{3,7}.0^{12,16}.0^{21,25}.0^{30,34}.0^{44,52}.0^{45,50}]dopentaconta-45,47,49-triene-2,8,11,17,20,26,29,35,38,41-decone
Traditional Name(3S,9S,12S,18S,21S,27S,30S,36S,39S,42S,44S,52S)-36-benzyl-9-isopropyl-44-(3-methylbut-2-en-1-yl)-18,27,39-tris(2-methylpropyl)-1,7,10,16,19,25,28,34,37,40,51-undecaazaoctacyclo[40.10.0.0^{3,7}.0^{12,16}.0^{21,25}.0^{30,34}.0^{44,52}.0^{45,50}]dopentaconta-45,47,49-triene-2,8,11,17,20,26,29,35,38,41-decone
CAS Registry NumberNot Available
SMILES
CC(C)C[C@@H]1NC(=O)[C@@H]2C[C@]3(CC=C(C)C)[C@@H](NC4=CC=CC=C34)N2C(=O)[C@@H]2CCCN2C(=O)[C@@H](NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC(C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC(C)C)NC(=O)C2CCCN2C(=O)[C@H](CC2=CC=CC=C2)NC1=O)C(C)C
InChI Identifier
InChI=1S/C68H97N11O10/c1-39(2)28-29-68-38-55-61(84)69-47(34-40(3)4)57(80)70-50(37-44-20-12-11-13-21-44)64(87)76-31-17-25-52(76)59(82)71-48(35-41(5)6)62(85)75-30-16-24-51(75)58(81)72-49(36-42(7)8)63(86)77-32-18-26-53(77)60(83)74-56(43(9)10)66(89)78-33-19-27-54(78)65(88)79(55)67(68)73-46-23-15-14-22-45(46)68/h11-15,20-23,28,40-43,47-56,67,73H,16-19,24-27,29-38H2,1-10H3,(H,69,84)(H,70,80)(H,71,82)(H,72,81)(H,74,83)/t47-,48-,49-,50-,51-,52?,53-,54-,55-,56-,67-,68-/m0/s1
InChI KeyMZDZNXTVCVUCNV-SEPHMDQTSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Symploca hydnoidesNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.33ALOGPS
logP5.02ChemAxon
logS-4.5ALOGPS
pKa (Strongest Acidic)11.63ChemAxon
pKa (Strongest Basic)1.94ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count11ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area259.08 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity337.18 m³·mol⁻¹ChemAxon
Polarizability133.04 ųChemAxon
Number of Rings9ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA025564
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound145721317
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Phyo MY, Ding CYG, Goh HC, Goh JX, Ong JFM, Chan SH, Yung PYM, Candra H, Tan LT: Trikoramide A, a Prenylated Cyanobactin from the Marine Cyanobacterium Symploca hydnoides. J Nat Prod. 2019 Dec 27;82(12):3482-3488. doi: 10.1021/acs.jnatprod.9b00675. Epub 2019 Nov 25. [PubMed:31763840 ]