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Record Information
Version1.0
Created at2021-01-06 02:40:39 UTC
Updated at2021-07-15 17:27:14 UTC
NP-MRD IDNP0018074
Secondary Accession NumbersNone
Natural Product Identification
Common NamePaenialvin D
Provided ByNPAtlasNPAtlas Logo
Description Paenialvin D is found in Paenibacillus alvei and Paenibacillus alvei DSM 29. It was first documented in 2018 (PMID: 29760411). Based on a literature review very few articles have been published on Paenialvin D.
Structure
Thumb
Synonyms
ValueSource
6-Amino-2-[(6-amino-2-{[(2S)-2-[(2-{[(2S)-2-({2-[(6-amino-2-{[(2R)-2-({2-[(2-{[(2R)-5-carbamimidamido-1-hydroxy-2-{[(2S)-1-hydroxy-2-({1-hydroxy-2-[(1-hydroxy-2-{[(2R)-1-hydroxy-2-({1-hydroxy-4-methyl-2-[(1,2,3-trihydroxypropylidene)amino]pentylidene}amino)propylidene]amino}-4-methylpentylidene)amino]-4-methylpentylidene}amino)-3-methylpentylidene]amino}pentylidene]amino}-1-hydroxy-4-methylpentylidene)amino]-1-hydroxy-4-methylpentylidene}amino)-1-hydroxy-3-methylbutylidene]amino}-1-hydroxyhexylidene)amino]-1-hydroxy-4-methylpentylidene}amino)-1,3-dihydroxybutylidene]amino}-1-hydroxy-4-methylpentylidene)amino]-1,3-dihydroxybutylidene]amino}-1-hydroxyhexylidene)amino]hexanoateGenerator
Chemical FormulaC91H170N22O22
Average Mass1924.4930 Da
Monoisotopic Mass1923.28601 Da
IUPAC Name(2S)-6-amino-2-[(2R)-6-amino-2-[(2S,3S)-2-[(2R)-2-[(2S,3S)-2-[(2S)-2-[(2R)-6-amino-2-[(2R)-2-[(2S)-2-[(2R)-2-[(2R)-5-carbamimidamido-2-[(2S,3S)-2-[(2R)-2-[(2S)-2-[(2R)-2-{2-[(2S)-2,3-dihydroxypropanamido]-4-methylpentanamido}propanamido]-4-methylpentanamido]-4-methylpentanamido]-3-methylpentanamido]pentanamido]-4-methylpentanamido]-4-methylpentanamido]-3-methylbutanamido]hexanamido]-4-methylpentanamido]-3-hydroxybutanamido]-4-methylpentanamido]-3-hydroxybutanamido]hexanamido]hexanoic acid
Traditional Name(2S)-6-amino-2-[(2R)-6-amino-2-[(2S,3S)-2-[(2R)-2-[(2S,3S)-2-[(2S)-2-[(2R)-6-amino-2-[(2R)-2-[(2S)-2-[(2R)-2-[(2R)-5-carbamimidamido-2-[(2S,3S)-2-[(2R)-2-[(2S)-2-[(2R)-2-{2-[(2S)-2,3-dihydroxypropanamido]-4-methylpentanamido}propanamido]-4-methylpentanamido]-4-methylpentanamido]-3-methylpentanamido]pentanamido]-4-methylpentanamido]-4-methylpentanamido]-3-methylbutanamido]hexanamido]-4-methylpentanamido]-3-hydroxybutanamido]-4-methylpentanamido]-3-hydroxybutanamido]hexanamido]hexanoic acid
CAS Registry NumberNot Available
SMILES
CCC(C)[C@H](NC(=O)C(CC(C)C)NC(=O)C(CC(C)C)NC(=O)[C@@H](C)NC(=O)C(CC(C)C)NC(=O)C(O)CO)C(=O)N[C@H](CCCNC(N)=N)C(=O)NC(CC(C)C)C(=O)NC(CC(C)C)C(=O)N[C@H](C(C)C)C(=O)NC(CCCCN)C(=O)NC(CC(C)C)C(=O)N[C@@H](C(C)O)C(=O)NC(CC(C)C)C(=O)N[C@@H](C(C)O)C(=O)NC(CCCCN)C(=O)NC(CCCCN)C(O)=O
InChI Identifier
InChI=1S/C91H170N22O22/c1-22-54(18)71(111-82(126)66(42-50(10)11)107-79(123)63(39-47(4)5)103-74(118)55(19)98-78(122)62(38-46(2)3)108-85(129)69(117)45-114)87(131)100-60(33-29-37-97-91(95)96)77(121)104-64(40-48(6)7)80(124)106-65(41-49(8)9)81(125)110-70(53(16)17)86(130)99-59(31-24-27-35-93)76(120)105-67(43-51(12)13)83(127)113-73(57(21)116)89(133)109-68(44-52(14)15)84(128)112-72(56(20)115)88(132)101-58(30-23-26-34-92)75(119)102-61(90(134)135)32-25-28-36-94/h46-73,114-117H,22-45,92-94H2,1-21H3,(H,98,122)(H,99,130)(H,100,131)(H,101,132)(H,102,119)(H,103,118)(H,104,121)(H,105,120)(H,106,124)(H,107,123)(H,108,129)(H,109,133)(H,110,125)(H,111,126)(H,112,128)(H,113,127)(H,134,135)(H4,95,96,97)/t54?,55-,56?,57?,58?,59?,60-,61?,62?,63?,64?,65?,66?,67?,68?,69?,70-,71+,72+,73+/m1/s1
InChI KeyADWNNLGWJIZCSE-BGVWCYQESA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Paenibacillus alveiLOTUS Database
Paenibacillus alvei DSM 29NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-3.6ChemAxon
pKa (Strongest Acidic)3.46ChemAxon
pKa (Strongest Basic)11.57ChemAxon
Physiological Charge3ChemAxon
Hydrogen Acceptor Count28ChemAxon
Hydrogen Donor Count27ChemAxon
Polar Surface Area723.78 ŲChemAxon
Rotatable Bond Count69ChemAxon
Refractivity512.74 m³·mol⁻¹ChemAxon
Polarizability211.86 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA021783
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78445627
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139589555
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Meng J, Zhong Z, Qian PY: Paenialvin A-D, four peptide antibiotics produced by Paenibacillus alvei DSM 29. J Antibiot (Tokyo). 2018 Sep;71(9):769-777. doi: 10.1038/s41429-017-0001-3. Epub 2018 May 14. [PubMed:29760411 ]