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Record Information
Version1.0
Created at2021-01-06 01:01:00 UTC
Updated at2021-07-15 17:21:10 UTC
NP-MRD IDNP0015872
Secondary Accession NumbersNone
Natural Product Identification
Common NameActinokineosin
Provided ByNPAtlasNPAtlas Logo
Description Actinokineosin is found in Actinokineospora spheciospongiae. It was first documented in 2017 (PMID: 27813109). Based on a literature review very few articles have been published on Actinokineosin.
Structure
Thumb
Synonyms
ValueSource
2-[(2-{[2-({2-[(2-{[2-({2-[(2-{[2-({[3-benzyl-15-(3-carbamimidamidopropyl)-9-(carboxymethyl)-1,4,7,10,13,16,20,23-octahydroxy-12-[(C-hydroxycarbonimidoyl)methyl]-25-[(4-hydroxyphenyl)methyl]-6-[(1H-indol-3-yl)methyl]-26-oxo-3H,6H,9H,12H,15H,18H,19H,22H,25H,26H,28H,29H,30H,30ah-pyrrolo[1,2-g]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-18-yl](hydroxy)methylidene}amino)-1-hydroxy-3-methylpentylidene]amino}-1-hydroxy-3-phenylpropylidene)amino]-1-hydroxyethylidene}amino)-1-hydroxyethylidene]amino}-1-hydroxy-3-(4-hydroxyphenyl)propylidene)amino]-1,3-dihydroxybutylidene}amino)-1-hydroxy-3-phenylpropylidene]amino}-1-hydroxy-3-methylpentylidene)amino]acetateGenerator
Chemical FormulaC103H131N23O26
Average Mass2107.3160 Da
Monoisotopic Mass2105.96356 Da
IUPAC Name2-[(2S,3R)-2-[(2S)-2-[(2S,3S)-2-[(2S)-2-[2-(2-{2-[(2R,3R)-2-{[(3S,6S,9R,12R,15S,18R,25S,30aR)-3-benzyl-15-(3-carbamimidamidopropyl)-12-(carbamoylmethyl)-9-(carboxymethyl)-25-[(4-hydroxyphenyl)methyl]-6-[(1H-indol-3-yl)methyl]-1,4,7,10,13,16,20,23,26-nonaoxo-triacontahydropyrrolo[1,2-g]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-18-yl]formamido}-3-methylpentanamido]-3-phenylpropanamido}acetamido)acetamido]-3-(4-hydroxyphenyl)propanamido]-3-hydroxybutanamido]-3-phenylpropanamido]-3-methylpentanamido]acetic acid
Traditional Name[(2S,3R)-2-[(2S)-2-[(2S,3S)-2-[(2S)-2-[2-(2-{2-[(2R,3R)-2-{[(3S,6S,9R,12R,15S,18R,25S,30aR)-3-benzyl-15-(3-carbamimidamidopropyl)-12-(carbamoylmethyl)-9-(carboxymethyl)-25-[(4-hydroxyphenyl)methyl]-6-(1H-indol-3-ylmethyl)-1,4,7,10,13,16,20,23,26-nonaoxo-icosahydro-2H-pyrrolo[1,2-g]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-18-yl]formamido}-3-methylpentanamido]-3-phenylpropanamido}acetamido)acetamido]-3-(4-hydroxyphenyl)propanamido]-3-hydroxybutanamido]-3-phenylpropanamido]-3-methylpentanamido]acetic acid
CAS Registry NumberNot Available
SMILES
CCC(C)C(NC(=O)C(CC1=CC=CC=C1)NC(=O)C(NC(=O)C(CC1=CC=C(O)C=C1)NC(=O)CNC(=O)CNC(=O)C(CC1=CC=CC=C1)NC(=O)C(NC(=O)C1CC(=O)NCC(=O)NC(CC2=CC=C(O)C=C2)C(=O)N2CCCC2C(=O)NC(CC2=CC=CC=C2)C(=O)NC(CC2=CNC3=CC=CC=C23)C(=O)NC(CC(O)=O)C(=O)NC(CC(N)=O)C(=O)NC(CCCNC(N)=N)C(=O)N1)C(C)CC)C(C)O)C(=O)NCC(O)=O
InChI Identifier
InChI=1S/C103H131N23O26/c1-6-55(3)86(99(149)112-54-85(137)138)123-96(146)72(43-60-25-15-10-16-26-60)122-101(151)88(57(5)127)125-95(145)70(44-61-31-35-64(128)36-32-61)113-82(133)53-110-81(132)51-111-89(139)69(41-58-21-11-8-12-22-58)121-100(150)87(56(4)7-2)124-97(147)75-48-80(131)109-52-83(134)114-77(45-62-33-37-65(129)38-34-62)102(152)126-40-20-30-78(126)98(148)120-71(42-59-23-13-9-14-24-59)91(141)116-73(46-63-50-108-67-28-18-17-27-66(63)67)92(142)119-76(49-84(135)136)94(144)117-74(47-79(104)130)93(143)115-68(90(140)118-75)29-19-39-107-103(105)106/h8-18,21-28,31-38,50,55-57,68-78,86-88,108,127-129H,6-7,19-20,29-30,39-49,51-54H2,1-5H3,(H2,104,130)(H,109,131)(H,110,132)(H,111,139)(H,112,149)(H,113,133)(H,114,134)(H,115,143)(H,116,141)(H,117,144)(H,118,140)(H,119,142)(H,120,148)(H,121,150)(H,122,151)(H,123,146)(H,124,147)(H,125,145)(H,135,136)(H,137,138)(H4,105,106,107)
InChI KeyFGFDHTMRQUJDFE-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Actinokineospora spheciospongiaeNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-5.9ChemAxon
pKa (Strongest Acidic)3.27ChemAxon
pKa (Strongest Basic)11.52ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count29ChemAxon
Hydrogen Donor Count27ChemAxon
Polar Surface Area771.08 ŲChemAxon
Rotatable Bond Count44ChemAxon
Refractivity550.34 m³·mol⁻¹ChemAxon
Polarizability211.89 ųChemAxon
Number of Rings9ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA028473
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound146684608
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Takasaka N, Kaweewan I, Ohnishi-Kameyama M, Kodani S: Isolation of a new antibacterial peptide actinokineosin from Actinokineospora spheciospongiae based on genome mining. Lett Appl Microbiol. 2017 Feb;64(2):150-157. doi: 10.1111/lam.12693. Epub 2016 Dec 6. [PubMed:27813109 ]