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Record Information
Version1.0
Created at2021-01-05 23:00:44 UTC
Updated at2021-07-15 17:15:19 UTC
NP-MRD IDNP0013736
Secondary Accession NumbersNone
Natural Product Identification
Common NameStreptomonomicin
Provided ByNPAtlasNPAtlas Logo
Description Streptomonomicin is found in Streptomonospora alba. It was first documented in 2015 (PMID: 25601074). Based on a literature review very few articles have been published on (2S)-1-[(2S)-2-{[(2S,3S)-2-{[(2S)-2-{[(2S,3S)-2-{[(2S)-2-{[(2S)-2-({[(2S)-1-[(2S)-2-[(2-{[(2S)-2-{[(2S,3S)-2-({[(3S,6S,9S,13S,16S,22S,25S,30aS)-1,4,7,11,14,17,20,23-octahydroxy-6-[(C-hydroxycarbonimidoyl)methyl]-13,22,25-tris(hydroxymethyl)-3-[(4-hydroxyphenyl)methyl]-16-(2-methylpropyl)-26-oxo-3H,6H,9H,10H,13H,16H,19H,22H,25H,26H,28H,29H,30H,30aH-pyrrolo[2,1-i]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-9-yl](hydroxy)methylidene}amino)-1-hydroxy-3-methylpentylidene]amino}-1-hydroxy-4-methylpentylidene]amino}-1-hydroxyethylidene)amino]-3-(4-hydroxyphenyl)propanoyl]pyrrolidin-2-yl](hydroxy)methylidene}amino)-1-hydroxypropylidene]amino}-1-hydroxy-4-methylpentylidene]amino}-1-hydroxy-3-methylpentylidene]amino}-1-hydroxy-3-methylbutylidene]amino}-1-hydroxy-3-methylpentylidene]amino}-3-(4-hydroxyphenyl)propanoyl]pyrrolidine-2-carboxylic acid.
Structure
Thumb
Synonyms
ValueSource
(2S)-1-[(2S)-2-{[(2S,3S)-2-{[(2S)-2-{[(2S,3S)-2-{[(2S)-2-{[(2S)-2-({[(2S)-1-[(2S)-2-[(2-{[(2S)-2-{[(2S,3S)-2-({[(3S,6S,9S,13S,16S,22S,25S,30as)-1,4,7,11,14,17,20,23-octahydroxy-6-[(C-hydroxycarbonimidoyl)methyl]-13,22,25-tris(hydroxymethyl)-3-[(4-hydroxyphenyl)methyl]-16-(2-methylpropyl)-26-oxo-3H,6H,9H,10H,13H,16H,19H,22H,25H,26H,28H,29H,30H,30ah-pyrrolo[2,1-i]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-9-yl](hydroxy)methylidene}amino)-1-hydroxy-3-methylpentylidene]amino}-1-hydroxy-4-methylpentylidene]amino}-1-hydroxyethylidene)amino]-3-(4-hydroxyphenyl)propanoyl]pyrrolidin-2-yl](hydroxy)methylidene}amino)-1-hydroxypropylidene]amino}-1-hydroxy-4-methylpentylidene]amino}-1-hydroxy-3-methylpentylidene]amino}-1-hydroxy-3-methylbutylidene]amino}-1-hydroxy-3-methylpentylidene]amino}-3-(4-hydroxyphenyl)propanoyl]pyrrolidine-2-carboxylateGenerator
Chemical FormulaC107H160N22O30
Average Mass2234.5810 Da
Monoisotopic Mass2233.16707 Da
IUPAC Name(2S)-1-{2-[(2S,3S)-2-[(2S)-2-[(2S,3S)-2-[(2S)-2-[(2S)-2-{[(2S)-1-[(2S)-2-{2-[(2S)-2-[(2S,3S)-2-{[(3S,6S,9S,13S,16S,22S,25S,30aS)-6-(carbamoylmethyl)-13,22,25-tris(hydroxymethyl)-3-[(4-hydroxyphenyl)methyl]-16-(2-methylpropyl)-1,4,7,11,14,17,20,23,26-nonaoxo-triacontahydropyrrolo[2,1-i]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-9-yl]formamido}-3-methylpentanamido]-4-methylpentanamido]acetamido}-3-(4-hydroxyphenyl)propanoyl]pyrrolidin-2-yl]formamido}propanamido]-4-methylpentanamido]-3-methylpentanamido]-3-methylbutanamido]-3-methylpentanamido]-3-(4-hydroxyphenyl)propanoyl}pyrrolidine-2-carboxylic acid
Traditional Name(2S)-1-{2-[(2S,3S)-2-[(2S)-2-[(2S,3S)-2-[(2S)-2-[(2S)-2-{[(2S)-1-[(2S)-2-{2-[(2S)-2-[(2S,3S)-2-{[(3S,6S,9S,13S,16S,22S,25S,30aS)-6-(carbamoylmethyl)-13,22,25-tris(hydroxymethyl)-3-[(4-hydroxyphenyl)methyl]-16-(2-methylpropyl)-1,4,7,11,14,17,20,23,26-nonaoxo-icosahydro-2H-pyrrolo[2,1-i]1,4,7,10,13,16,19,22,25-nonaazacyclooctacosan-9-yl]formamido}-3-methylpentanamido]-4-methylpentanamido]acetamido}-3-(4-hydroxyphenyl)propanoyl]pyrrolidin-2-yl]formamido}propanamido]-4-methylpentanamido]-3-methylpentanamido]-3-methylbutanamido]-3-methylpentanamido]-3-(4-hydroxyphenyl)propanoyl}pyrrolidine-2-carboxylic acid
CAS Registry NumberNot Available
SMILES
CC[C@H](C)[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC1=CC=C(O)C=C1)NC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)[C@@H](NC(=O)[C@@H]1CC(=O)N[C@@H](CO)C(=O)N[C@@H](CC(C)C)C(=O)NCC(=O)N[C@@H](CO)C(=O)N[C@@H](CO)C(=O)N2CCC[C@H]2C(=O)N[C@@H](CC2=CC=C(O)C=C2)C(=O)N[C@@H](CC(N)=O)C(=O)N1)[C@@H](C)CC)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CC1=CC=C(O)C=C1)C(=O)N1CCC[C@H]1C(O)=O
InChI Identifier
InChI=1S/C107H160N22O30/c1-16-57(12)86(124-95(146)72-47-82(137)113-75(50-130)96(147)116-67(40-53(4)5)90(141)110-49-84(139)114-76(51-131)97(148)122-77(52-132)106(157)128-38-20-23-79(128)99(150)119-70(43-61-25-31-64(133)32-26-61)92(143)117-71(46-81(108)136)93(144)118-72)101(152)120-68(41-54(6)7)91(142)109-48-83(138)112-73(44-62-27-33-65(134)34-28-62)104(155)127-37-19-22-78(127)98(149)111-60(15)89(140)115-69(42-55(8)9)94(145)125-88(59(14)18-3)103(154)123-85(56(10)11)100(151)126-87(58(13)17-2)102(153)121-74(45-63-29-35-66(135)36-30-63)105(156)129-39-21-24-80(129)107(158)159/h25-36,53-60,67-80,85-88,130-135H,16-24,37-52H2,1-15H3,(H2,108,136)(H,109,142)(H,110,141)(H,111,149)(H,112,138)(H,113,137)(H,114,139)(H,115,140)(H,116,147)(H,117,143)(H,118,144)(H,119,150)(H,120,152)(H,121,153)(H,122,148)(H,123,154)(H,124,146)(H,125,145)(H,126,151)(H,158,159)/t57-,58-,59-,60-,67-,68-,69-,70-,71-,72-,73-,74-,75-,76-,77-,78-,79-,80-,85-,86-,87-,88-/m0/s1
InChI KeyZUTGGQMQIWDJCW-BCPYKWEZSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomonospora albaNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-4.1ChemAxon
pKa (Strongest Acidic)3.63ChemAxon
pKa (Strongest Basic)-6ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count30ChemAxon
Hydrogen Donor Count26ChemAxon
Polar Surface Area786.5 ŲChemAxon
Rotatable Bond Count47ChemAxon
Refractivity566.45 m³·mol⁻¹ChemAxon
Polarizability232.05 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA003689
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78440087
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139584119
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Metelev M, Tietz JI, Melby JO, Blair PM, Zhu L, Livnat I, Severinov K, Mitchell DA: Structure, bioactivity, and resistance mechanism of streptomonomicin, an unusual lasso Peptide from an understudied halophilic actinomycete. Chem Biol. 2015 Feb 19;22(2):241-50. doi: 10.1016/j.chembiol.2014.11.017. Epub 2015 Jan 15. [PubMed:25601074 ]