Np mrd loader

Record Information
Version1.0
Created at2021-01-05 22:28:13 UTC
Updated at2021-07-15 17:13:09 UTC
NP-MRD IDNP0012943
Secondary Accession NumbersNone
Natural Product Identification
Common NamePyrenulic acid F
Provided ByNPAtlasNPAtlas Logo
Description Pyrenulic acid F is found in Pyrenula sp. It was first documented in 2014 (PMID: 24926891). Based on a literature review very few articles have been published on (2E,4E)-5-[(1S,2S,4S,5R,5aR,7aR,11aS,11bS)-4-[(2S)-butan-2-yl]-1,5,11b-trihydroxy-5,6,9-trimethyl-1H,2H,4H,5H,5aH,7aH,8H,11H,11aH,11bH-naphtho[1,2-d]oxepin-2-yl]penta-2,4-dienoic acid.
Structure
Thumb
Synonyms
ValueSource
(2E,4E)-5-[(1S,2S,4S,5R,5AR,7ar,11as,11BS)-4-[(2S)-butan-2-yl]-1,5,11b-trihydroxy-5,6,9-trimethyl-1H,2H,4H,5H,5ah,7ah,8H,11H,11ah,11BH-naphtho[1,2-D]oxepin-2-yl]penta-2,4-dienoateGenerator
Pyrenulate FGenerator
Chemical FormulaC26H38O6
Average Mass446.5840 Da
Monoisotopic Mass446.26684 Da
IUPAC Name(2E,4E)-5-[(1S,2S,4S,5R,5aR,7aR,11aS,11bS)-4-[(2S)-butan-2-yl]-1,5,11b-trihydroxy-5,6,9-trimethyl-1H,2H,4H,5H,5aH,7aH,8H,11H,11aH,11bH-naphtho[1,2-d]oxepin-2-yl]penta-2,4-dienoic acid
Traditional Name(2E,4E)-5-[(1S,2S,4S,5R,5aR,7aR,11aS,11bS)-4-[(2S)-butan-2-yl]-1,5,11b-trihydroxy-5,6,9-trimethyl-1H,2H,4H,5aH,7aH,8H,11H,11aH-naphtho[1,2-d]oxepin-2-yl]penta-2,4-dienoic acid
CAS Registry NumberNot Available
SMILES
CC[C@H](C)[C@@H]1O[C@@H](\C=C\C=C\C(O)=O)[C@H](O)[C@]2(O)[C@H]3CC=C(C)C[C@@H]3C=C(C)[C@@H]2[C@@]1(C)O
InChI Identifier
InChI=1S/C26H38O6/c1-6-16(3)24-25(5,30)22-17(4)14-18-13-15(2)11-12-19(18)26(22,31)23(29)20(32-24)9-7-8-10-21(27)28/h7-11,14,16,18-20,22-24,29-31H,6,12-13H2,1-5H3,(H,27,28)/b9-7+,10-8+/t16-,18+,19-,20-,22+,23-,24-,25+,26-/m0/s1
InChI KeyWQAFDIKVNMLDOJ-GTFHNBDISA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Pyrenula sp.NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.02ALOGPS
logP3ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)3.96ChemAxon
pKa (Strongest Basic)-3.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area107.22 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity126.51 m³·mol⁻¹ChemAxon
Polarizability50.23 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA010052
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78437457
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139585874
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Le DH, Takenaka Y, Hamada N, Mizushina Y, Tanahashi T: Polyketides from the cultured lichen mycobiont of a Vietnamese Pyrenula sp. J Nat Prod. 2014 Jun 27;77(6):1404-12. doi: 10.1021/np500143k. Epub 2014 Jun 13. [PubMed:24926891 ]