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Record Information
Version1.0
Created at2020-12-09 03:31:26 UTC
Updated at2021-07-15 16:55:05 UTC
NP-MRD IDNP0006534
Secondary Accession NumbersNone
Natural Product Identification
Common NameActinomycin G6
Provided ByNPAtlasNPAtlas Logo
Description Actinomycin G6 is found in Streptomyces, Streptomyces iakyrus and Streptomyces iakyrus DSM41873. It was first documented in 2006 (PMID: 16933866). Based on a literature review very few articles have been published on N-[(6S,9R,10S,13R,16S,18S,18aS)-11,18-dihydroxy-2,5,9,16-tetramethyl-1,4,7,14-tetraoxo-6,13-bis(propan-2-yl)-1H,2H,3H,4H,5H,6H,7H,9H,10H,13H,14H,16H,17H,18H,18aH-pyrrolo[2,1-i]1-oxa-4,7,10,13-tetraazacyclohexadecan-10-yl]-1-{[(2R)-2-[(6S,9S,12R,17aS)-7,10-dihydroxy-2,5,6-trimethyl-1,4,13-trioxo-12-(propan-2-yl)-1H,2H,3H,4H,5H,6H,9H,12H,13H,15H,16H,17H,17aH-pyrrolo[1,2-a]1,4,7,10,13-pentaazacyclopentadecan-9-yl]-2-hydroxyethoxy]carbonyl}-2-amino-4,6-dimethyl-3-oxo-3H-phenoxazine-9-carboximidic acid.
Structure
Thumb
Synonyms
ValueSource
N-[(6S,9R,10S,13R,16S,18S,18AS)-11,18-dihydroxy-2,5,9,16-tetramethyl-1,4,7,14-tetraoxo-6,13-bis(propan-2-yl)-1H,2H,3H,4H,5H,6H,7H,9H,10H,13H,14H,16H,17H,18H,18ah-pyrrolo[2,1-i]1-oxa-4,7,10,13-tetraazacyclohexadecan-10-yl]-1-{[(2R)-2-[(6S,9S,12R,17as)-7,10-dihydroxy-2,5,6-trimethyl-1,4,13-trioxo-12-(propan-2-yl)-1H,2H,3H,4H,5H,6H,9H,12H,13H,15H,16H,17H,17ah-pyrrolo[1,2-a]1,4,7,10,13-pentaazacyclopentadecan-9-yl]-2-hydroxyethoxy]carbonyl}-2-amino-4,6-dimethyl-3-oxo-3H-phenoxazine-9-carboximidateGenerator
Chemical FormulaC61H84N12O18
Average Mass1273.4090 Da
Monoisotopic Mass1272.60265 Da
IUPAC Name(2R)-2-[(6S,9S,12R,17aS)-2,5,6-trimethyl-1,4,7,10,13-pentaoxo-12-(propan-2-yl)-hexadecahydro-1H-pyrrolo[1,2-a]1,4,7,10,13-pentaazacyclopentadecan-9-yl]-2-hydroxyethyl 9-{[(6S,9R,10S,13R,16S,18S,18aS)-18-hydroxy-2,5,9,16-tetramethyl-1,4,7,11,14-pentaoxo-6,13-bis(propan-2-yl)-hexadecahydro-1H-pyrrolo[2,1-i]1-oxa-4,7,10,13-tetraazacyclohexadecan-10-yl]carbamoyl}-2-amino-4,6-dimethyl-3-oxo-3H-phenoxazine-1-carboxylate
Traditional Name(2R)-2-[(6S,9S,12R,17aS)-12-isopropyl-2,5,6-trimethyl-1,4,7,10,13-pentaoxo-decahydropyrrolo[1,2-a]1,4,7,10,13-pentaazacyclopentadecan-9-yl]-2-hydroxyethyl 9-{[(6S,9R,10S,13R,16S,18S,18aS)-18-hydroxy-6,13-diisopropyl-2,5,9,16-tetramethyl-1,4,7,11,14-pentaoxo-decahydropyrrolo[2,1-i]1-oxa-4,7,10,13-tetraazacyclohexadecan-10-yl]carbamoyl}-2-amino-4,6-dimethyl-3-oxophenoxazine-1-carboxylate
CAS Registry NumberNot Available
SMILES
CC(C)[C@H]1NC(=O)[C@@H](NC(=O)[C@H](C)N(C)C(=O)CN(C)C(=O)[C@@H]2CCCN2C1=O)[C@@H](O)COC(=O)C1=C(N)C(=O)C(C)=C2OC3=C(C)C=CC(C(=O)N[C@H]4[C@@H](C)OC(=O)[C@H](C(C)C)N(C)C(=O)CN(C)C(=O)[C@@H]5[C@@H](O)C[C@H](C)N5C(=O)[C@H](NC4=O)C(C)C)=C3N=C12
InChI Identifier
InChI=1S/C61H84N12O18/c1-25(2)41-57(84)72-20-16-17-34(72)56(83)68(12)22-37(76)70(14)31(10)52(79)67-45(55(82)64-41)36(75)24-89-60(87)39-40(62)49(78)30(9)51-46(39)63-44-33(19-18-28(7)50(44)91-51)53(80)66-43-32(11)90-61(88)47(27(5)6)71(15)38(77)23-69(13)59(86)48-35(74)21-29(8)73(48)58(85)42(26(3)4)65-54(43)81/h18-19,25-27,29,31-32,34-36,41-43,45,47-48,74-75H,16-17,20-24,62H2,1-15H3,(H,64,82)(H,65,81)(H,66,80)(H,67,79)/t29-,31-,32+,34-,35-,36-,41+,42+,43-,45-,47-,48-/m0/s1
InChI KeyKTDUETWVXTYQEE-AWOIIBEVSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
StreptomycesNPAtlas
Streptomyces iakyrusLOTUS Database
Streptomyces iakyrus DSM41873Bacteria
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.67ALOGPS
logP-2.5ChemAxon
logS-4.5ALOGPS
pKa (Strongest Acidic)10.17ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count18ChemAxon
Hydrogen Donor Count7ChemAxon
Polar Surface Area396 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity324.46 m³·mol⁻¹ChemAxon
Polarizability131.74 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA008780
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID24710217
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound16083117
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Bitzer J, Gesheva V, Zeeck A: Actinomycins with altered threonine units in the beta-peptidolactone. J Nat Prod. 2006 Aug;69(8):1153-7. doi: 10.1021/np060063g. [PubMed:16933866 ]