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Record Information
Version1.0
Created at2020-12-09 02:29:49 UTC
Updated at2021-07-15 16:51:14 UTC
NP-MRD IDNP0005171
Secondary Accession NumbersNone
Natural Product Identification
Common NameMersacidin
Provided ByNPAtlasNPAtlas Logo
DescriptionMersacidin belongs to the class of organic compounds known as polypeptides. These are peptides containing ten or more amino acid residues. Mersacidin is found in Bacillus. It was first documented in 1992 (PMID: 1500347). Based on a literature review a significant number of articles have been published on Mersacidin (PMID: 33689311) (PMID: 33281792) (PMID: 33094436) (PMID: 30479173).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC80H120N20O21S4
Average Mass1826.2000 Da
Monoisotopic Mass1824.78198 Da
IUPAC Name3-[(1S,4R,7R,8R,11S,14R,17Z,20S,26R)-7-[(15S,18S,21R,22R,25S,30aR)-22-(2-{[(2S,6S)-6-amino-2-methyl-5-oxo-1,4-thiazepan-3-yl]formamido}-3-phenylpropanamido)-21-methyl-25-(2-methylpropyl)-1,4,7,10,13,16,23,26-octaoxo-15-(propan-2-yl)-octacosahydro-1H-pyrrolo[2,1-u]1-thia-4,7,10,13,16,19,22,25-octaazacyclooctacosane-18-amido]-14-[(2S)-butan-2-yl]-8,20-dimethyl-23-methylidene-4-(2-methylpropyl)-3,6,12,15,21,24,27-heptaoxo-9,19-dithia-2,5,13,16,22,25,28-heptaazabicyclo[9.9.8]octacos-17-en-26-yl]propanoic acid
Traditional Name3-[(1S,4R,7R,8R,11S,14R,17Z,20S,26R)-7-[(15S,18S,21R,22R,25S,30aR)-22-(2-{[(2S,6S)-6-amino-2-methyl-5-oxo-1,4-thiazepan-3-yl]formamido}-3-phenylpropanamido)-15-isopropyl-21-methyl-25-(2-methylpropyl)-1,4,7,10,13,16,23,26-octaoxo-icosahydro-2H-pyrrolo[2,1-u]1-thia-4,7,10,13,16,19,22,25-octaazacyclooctacosane-18-amido]-14-[(2S)-butan-2-yl]-8,20-dimethyl-23-methylidene-4-(2-methylpropyl)-3,6,12,15,21,24,27-heptaoxo-9,19-dithia-2,5,13,16,22,25,28-heptaazabicyclo[9.9.8]octacos-17-en-26-yl]propanoic acid
CAS Registry NumberNot Available
SMILES
CCC(C)C1NC(=O)C2CSC(C)C(NC(=O)C3CSC(C)C(NC(=O)C(CC4=CC=CC=C4)NC(=O)C4NC(=O)C(N)CSC4C)C(=O)NC(CC(C)C)C(=O)N4CCCC4C(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)NC(C(C)C)C(=O)N3)C(=O)NC(CC(C)C)C(=O)NC(C(C)S\C=C/NC1=O)C(=O)NC(=C)C(=O)NC(CCC(O)=O)C(=O)N2
InChI Identifier
InChI=1S/C80H120N20O21S4/c1-14-40(8)61-74(115)82-24-26-122-42(10)62-76(117)87-41(9)66(107)88-48(22-23-59(105)106)68(109)92-52(71(112)95-61)35-124-44(12)64(78(119)89-49(27-37(2)3)69(110)97-62)99-72(113)53-36-125-45(13)65(98-70(111)50(29-46-19-16-15-17-20-46)90-77(118)63-43(11)123-34-47(81)67(108)96-63)79(120)91-51(28-38(4)5)80(121)100-25-18-21-54(100)73(114)86-32-57(103)84-30-55(101)83-31-56(102)85-33-58(104)94-60(39(6)7)75(116)93-53/h15-17,19-20,24,26,37-40,42-45,47-54,60-65H,9,14,18,21-23,25,27-36,81H2,1-8,10-13H3,(H,82,115)(H,83,101)(H,84,103)(H,85,102)(H,86,114)(H,87,117)(H,88,107)(H,89,119)(H,90,118)(H,91,120)(H,92,109)(H,93,116)(H,94,104)(H,95,112)(H,96,108)(H,97,110)(H,98,111)(H,99,113)(H,105,106)/b26-24-
InChI KeyJSWKNDSDVHJUKY-LCUIJRPUSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
BacillusNPAtlas
Chemical Taxonomy
Description Belongs to the class of organic compounds known as polypeptides. These are peptides containing ten or more amino acid residues.
KingdomOrganic compounds
Super ClassOrganic Polymers
ClassPolypeptides
Sub ClassNot Available
Direct ParentPolypeptides
Alternative Parents
Substituents
  • Polypeptide
  • Cyclic alpha peptide
  • Phenylalanine or derivatives
  • N-acyl-alpha amino acid or derivatives
  • Macrolactam
  • Alpha-amino acid amide
  • N-substituted-alpha-amino acid
  • Alpha-amino acid or derivatives
  • Amphetamine or derivatives
  • Monocyclic benzene moiety
  • Fatty acyl
  • Fatty amide
  • Benzenoid
  • Pyrrolidine
  • Tertiary carboxylic acid amide
  • Amino acid
  • Secondary carboxylic acid amide
  • Amino acid or derivatives
  • Lactam
  • Thioenolether
  • Carboxamide group
  • Azacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Carboxylic acid
  • Dialkylthioether
  • Thioether
  • Monocarboxylic acid or derivatives
  • Amine
  • Organopnictogen compound
  • Organic oxygen compound
  • Carbonyl group
  • Organic nitrogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary amine
  • Organooxygen compound
  • Primary aliphatic amine
  • Organonitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-8.6ChemAxon
pKa (Strongest Acidic)3.6ChemAxon
pKa (Strongest Basic)7.75ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count22ChemAxon
Hydrogen Donor Count20ChemAxon
Polar Surface Area607.43 ŲChemAxon
Rotatable Bond Count18ChemAxon
Refractivity459.23 m³·mol⁻¹ChemAxon
Polarizability185.19 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA020628
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78444907
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound16172942
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Chatterjee S, Chatterjee S, Lad SJ, Phansalkar MS, Rupp RH, Ganguli BN, Fehlhaber HW, Kogler H: Mersacidin, a new antibiotic from Bacillus. Fermentation, isolation, purification and chemical characterization. J Antibiot (Tokyo). 1992 Jun;45(6):832-8. doi: 10.7164/antibiotics.45.832. [PubMed:1500347 ]
  2. Viel JH, Jaarsma AH, Kuipers OP: Heterologous Expression of Mersacidin in Escherichia coli Elucidates the Mode of Leader Processing. ACS Synth Biol. 2021 Mar 19;10(3):600-608. doi: 10.1021/acssynbio.0c00601. Epub 2021 Mar 10. [PubMed:33689311 ]
  3. Xu P, Xie S, Liu W, Jin P, Wei D, Yaseen DG, Wang Y, Miao W: Comparative Genomics Analysis Provides New Strategies for Bacteriostatic Ability of Bacillus velezensis HAB-2. Front Microbiol. 2020 Nov 17;11:594079. doi: 10.3389/fmicb.2020.594079. eCollection 2020. [PubMed:33281792 ]
  4. Emam AM, Dunlap CA: Genomic and phenotypic characterization of Bacillus velezensis AMB-y1; a potential probiotic to control pathogens in aquaculture. Antonie Van Leeuwenhoek. 2020 Dec;113(12):2041-2052. doi: 10.1007/s10482-020-01476-5. Epub 2020 Oct 23. [PubMed:33094436 ]
  5. Sandiford SK: Current developments in lantibiotic discovery for treating Clostridium difficile infection. Expert Opin Drug Discov. 2019 Jan;14(1):71-79. doi: 10.1080/17460441.2019.1549032. Epub 2018 Nov 27. [PubMed:30479173 ]