Np mrd loader

Record Information
Version1.0
Created at2020-12-09 02:10:33 UTC
Updated at2021-07-15 16:50:04 UTC
NP-MRD IDNP0004753
Secondary Accession NumbersNone
Natural Product Identification
Common NameQuartromicin D3
Provided ByNPAtlasNPAtlas Logo
Description Quartromicin D3 is found in Amycolatopsis and Amycolatopsis orientalis Q427-8 (ATCC 53884). It was first documented in 1992 (PMID: 1313409).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC65H86O20
Average Mass1187.3830 Da
Monoisotopic Mass1186.57125 Da
IUPAC Name(1S,3S,6R,7Z,9R,10R,11R,13S,15R,18S,19Z,21Z,23R,24R,25R,27R,29S,32R,33Z,35S,36S,37R,39R,41S,44S,45Z,47Z,49S,50S,51S)-9,11,23,25,35,37,49,51-octahydroxy-4,16,30,42-tetrakis(hydroxymethyl)-3,6,15,18,22,29,32,41,48-nonamethyl-12,26,38,52-tetraoxanonacyclo[48.2.1.1^{10,13}.1^{24,27}.1^{36,39}.0^{1,6}.0^{13,18}.0^{27,32}.0^{39,44}]hexapentaconta-4,7,16,19,21,30,33,42,45,47-decaene-53,54,55,56-tetrone
Traditional Name(1S,3S,6R,7Z,9R,10R,11R,13S,15R,18S,19Z,21Z,23R,24R,25R,27R,29S,32R,33Z,35S,36S,37R,39R,41S,44S,45Z,47Z,49S,50S,51S)-9,11,23,25,35,37,49,51-octahydroxy-4,16,30,42-tetrakis(hydroxymethyl)-3,6,15,18,22,29,32,41,48-nonamethyl-12,26,38,52-tetraoxanonacyclo[48.2.1.1^{10,13}.1^{24,27}.1^{36,39}.0^{1,6}.0^{13,18}.0^{27,32}.0^{39,44}]hexapentaconta-4,7,16,19,21,30,33,42,45,47-decaene-53,54,55,56-tetrone
CAS Registry NumberNot Available
SMILES
CC1CC23OC(O)C(C(O)\C=C/C4(C)C=C(CO)C(C)CC44OC(O)C(C(O)\C(C)=C/C=C\C5(C)C=C(CO)C(C)CC55OC(O)C(C(O)\C=C/C6(C)C=C(CO)C(C)CC66OC(O)C(C(O)\C(C)=C/C=C\C2C=C1CO)C6=O)C5=O)C4=O)C3=O
InChI Identifier
InChI=1S/C65H86O20/c1-32-12-10-14-42-20-38(28-66)34(3)21-62(42)51(74)45(55(78)82-62)43(70)15-18-60(8)26-40(30-68)37(6)24-65(60)54(77)48(58(81)85-65)50(73)33(2)13-11-17-59(7)25-39(29-67)35(4)22-63(59)52(75)46(56(79)83-63)44(71)16-19-61(9)27-41(31-69)36(5)23-64(61)53(76)47(49(32)72)57(80)84-64/h10-20,25-27,34-37,42-50,55-58,66-73,78-81H,21-24,28-31H2,1-9H3/b14-10-,17-11-,18-15-,19-16-,32-12-,33-13-
InChI KeyMVLBVZMWXZPUSM-RMGFBMTASA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
AmycolatopsisNPAtlas
Amycolatopsis orientalis Q427-8 (ATCC 53884)Bacteria
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.92ALOGPS
logP2.17ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)10.72ChemAxon
pKa (Strongest Basic)-4.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count20ChemAxon
Hydrogen Donor Count12ChemAxon
Polar Surface Area347.96 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity318.06 m³·mol⁻¹ChemAxon
Polarizability126.49 ųChemAxon
Number of Rings9ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
External LinksNot Available
References
General References
  1. Tsunakawa M, Tenmyo O, Tomita K, Naruse N, Kotake C, Miyaki T, Konishi M, Oki T: Quartromicin, a complex of novel antiviral antibiotics. I. Production, isolation, physico-chemical properties and antiviral activity. J Antibiot (Tokyo). 1992 Feb;45(2):180-8. doi: 10.7164/antibiotics.45.180. [PubMed:1313409 ]