Np mrd loader

Record Information
Version1.0
Created at2020-12-09 01:33:07 UTC
Updated at2021-07-15 16:48:04 UTC
NP-MRD IDNP0004043
Secondary Accession NumbersNone
Natural Product Identification
Common NameTripropeptin A
Provided ByNPAtlasNPAtlas Logo
Description Tripropeptin A is found in Lysobacter sp. It was first documented in 2001 (PMID: 11858660). Based on a literature review very few articles have been published on 2-[10-(3-carbamimidamidopropyl)-25-[carboxy(hydroxy)methyl]-8,11,14,21,23,30-hexahydroxy-32-(1-hydroxyethyl)-16-(hydroxymethyl)-28-(8-methylnonyl)-2,17,26,33-tetraoxo-27-oxa-3,9,12,15,18,24,31,34-octaazatetracyclo[32.3.0.0³,⁷.0¹⁸,²²]Heptatriaconta-8,11,14,23,30-pentaen-13-yl]-2-hydroxyacetic acid.
Structure
Thumb
Synonyms
ValueSource
2-[10-(3-Carbamimidamidopropyl)-25-[carboxy(hydroxy)methyl]-8,11,14,21,23,30-hexahydroxy-32-(1-hydroxyethyl)-16-(hydroxymethyl)-28-(8-methylnonyl)-2,17,26,33-tetraoxo-27-oxa-3,9,12,15,18,24,31,34-octaazatetracyclo[32.3.0.0,.0,]heptatriaconta-8,11,14,23,30-pentaen-13-yl]-2-hydroxyacetateGenerator
Chemical FormulaC49H79N11O19
Average Mass1126.2290 Da
Monoisotopic Mass1125.55537 Da
IUPAC Name(2R)-2-[(1S,7S,10S,13R,16S,21S,22S,25S,28R,32S)-25-[(S)-carboxy(hydroxy)methyl]-10-{3-[(diaminomethylidene)amino]propyl}-21-hydroxy-32-[(1R)-1-hydroxyethyl]-16-(hydroxymethyl)-28-(8-methylnonyl)-2,8,11,14,17,23,26,30,33-nonaoxo-27-oxa-3,9,12,15,18,24,31,34-octaazatetracyclo[32.3.0.0^{3,7}.0^{18,22}]heptatriacontan-13-yl]-2-hydroxyacetic acid
Traditional Name(R)-[(1S,7S,10S,13R,16S,21S,22S,25S,28R,32S)-25-[(S)-carboxy(hydroxy)methyl]-10-{3-[(diaminomethylidene)amino]propyl}-21-hydroxy-32-[(1R)-1-hydroxyethyl]-16-(hydroxymethyl)-28-(8-methylnonyl)-2,8,11,14,17,23,26,30,33-nonaoxo-27-oxa-3,9,12,15,18,24,31,34-octaazatetracyclo[32.3.0.0^{3,7}.0^{18,22}]heptatriacontan-13-yl](hydroxy)acetic acid
CAS Registry NumberNot Available
SMILES
CC(C)CCCCCCCC1CC(=O)NC(C(C)O)C(=O)N2CCCC2C(=O)N2CCCC2C(=O)NC(CCCN=C(N)N)C(=O)NC(C(O)C(O)=O)C(=O)NC(CO)C(=O)N2CCC(O)C2C(=O)NC(C(O)C(O)=O)C(=O)O1
InChI Identifier
InChI=1S/C49H79N11O19/c1-24(2)12-7-5-4-6-8-13-26-22-32(64)55-33(25(3)62)45(73)59-20-11-16-30(59)44(72)58-19-10-15-29(58)40(68)53-27(14-9-18-52-49(50)51)39(67)56-34(37(65)46(74)75)41(69)54-28(23-61)43(71)60-21-17-31(63)36(60)42(70)57-35(48(78)79-26)38(66)47(76)77/h24-31,33-38,61-63,65-66H,4-23H2,1-3H3,(H,53,68)(H,54,69)(H,55,64)(H,56,67)(H,57,70)(H,74,75)(H,76,77)(H4,50,51,52)
InChI KeyZJFQULWBEYLWOH-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Lysobacter sp.NPAtlas
Species Where Detected
Species NameSourceReference
Lysobacter sp. BMK333-48F3KNApSAcK Database
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-0.95ALOGPS
logP-7.7ChemAxon
logS-3.3ALOGPS
pKa (Strongest Acidic)2.8ChemAxon
pKa (Strongest Basic)10.63ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count21ChemAxon
Hydrogen Donor Count14ChemAxon
Polar Surface Area472.88 ŲChemAxon
Rotatable Bond Count18ChemAxon
Refractivity269.4 m³·mol⁻¹ChemAxon
Polarizability113.56 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA012846
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78444237
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound58960778
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Hashizume H, Igarashi M, Hattori S, Hori M, Hamada M, Takeuchi T: Tripropeptins, novel antimicrobial agents produced by Lysobacter sp. I. Taxonomy, isolation and biological activities. J Antibiot (Tokyo). 2001 Dec;54(12):1054-9. doi: 10.7164/antibiotics.54.1054. [PubMed:11858660 ]