NP-MRD: Showing NP-Card for 3-Deformyl-3-hydroxymethyl sordarin (NP0004006)

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Record Information

Version

1.0

Created at

2020-12-09 01:31:44 UTC

Updated at

2021-07-15 16:47:58 UTC

NP-MRD ID

NP0004006

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3-Deformyl-3-hydroxymethyl sordarin

Provided By

NPAtlas

Description

3-Deformyl-3-hydroxymethyl sordarin is found in Mortierella isabellina ATCC38063 and Streptomyces. It was first documented in 2001 (PMID: 11827037). Based on a literature review very few articles have been published on (4R,5R,8R)-2-{[(3,4-dihydroxy-5-methoxy-6-methyloxan-2-yl)oxy]methyl}-9-(hydroxymethyl)-5-methyl-13-(propan-2-yl)tetracyclo[7.4.0.0²,¹¹.0⁴,⁸]Tridec-12-ene-1-carboxylic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307012117493D          

 77 81  0  0  0  0            999 V2000
    5.5020    1.2751   -2.3150 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4841    0.6730   -1.5788 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9958   -0.3252   -0.7517 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5424   -0.0013    0.6659 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7695   -0.0221    1.5430 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6742   -0.9891    1.1349 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4542   -0.9416    0.3780 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8168    0.1918    0.5372 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6963    0.5690    1.0709 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5610   -0.0152    0.4979 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6983   -1.4660    0.6466 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.0912   -1.8920    0.9976 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4500   -3.3190    0.7032 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7649   -3.9287   -0.4532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9747   -3.2339    0.5321 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.3068   -1.7228    0.5066 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0130   -1.2269    0.0176 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7718    0.2402   -0.1424 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0902    0.9515   -0.3187 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.7309    0.4054   -1.4744 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9662    0.2897   -1.4536 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5582    0.4520   -0.9901 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4591    1.9193   -0.7420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2359    2.1379    0.3188 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4059    3.4765    0.9320 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8069    4.0180    0.9192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5653    4.4692    0.1307 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8115    0.8244    0.8046 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1974    0.9034    2.1919 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3668    0.6717    2.5649 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2738    1.2438    3.1476 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7832   -1.2599   -1.0933 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0712   -2.3740   -1.4790 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2502   -1.6167   -1.1433 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4834   -2.5784   -0.1509 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2330    1.7236   -1.6098 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0028    0.5232   -2.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0438    2.1035   -2.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0882   -0.4478   -0.8340 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0654    0.9903    0.7476 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0757    0.9794    1.8793 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6119   -0.6409    2.4627 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6442   -0.4714    1.0314 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9241   -1.8342    0.7533 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6641    0.4356    2.2146 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5952    1.7034    0.9503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2752   -2.0226   -0.1708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1107   -1.7519    1.5880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3079   -1.7390    2.0504 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2597   -3.9498    1.6051 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8235   -4.4265   -0.0775 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3640   -4.7507   -0.8987 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4605   -3.2708   -1.2621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1701   -3.6090   -0.4894 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5112   -3.7482    1.3256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1533   -1.6046   -0.2016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5826   -1.4954    1.5444 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8380   -1.8009   -0.9600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9880    2.0260   -0.5583 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7541    0.8629    0.5556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6918    0.6503   -1.3684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3682    1.1911   -1.9962 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1551   -0.5542   -2.1108 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2126    0.0155   -1.5642 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1284    2.6253   -1.3208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0057    3.4727    1.9853 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5026    3.2995    1.4027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1124    4.2050   -0.1130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8849    4.9768    1.4856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9865    4.4366   -0.9059 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4872    4.1187    0.0321 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6548    5.4924    0.5060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5716    1.8195    3.9504 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5584   -0.3651   -1.7148 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7662   -2.3447   -2.4310 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5715   -1.9866   -2.1218 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4357   -2.6362    0.1016 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
 10  9  1  1  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  6  0  0  0
 19 20  1  0  0  0  0
 18 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 24 28  1  0  0  0  0
 28 29  1  1  0  0  0
 29 30  2  0  0  0  0
 29 31  1  0  0  0  0
  7 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  1  0  0  0  0
 34 35  1  0  0  0  0
 34  3  1  0  0  0  0
 22 10  1  0  0  0  0
 28 10  1  0  0  0  0
 17 12  1  0  0  0  0
 28 18  1  0  0  0  0
  1 36  1  0  0  0  0
  1 37  1  0  0  0  0
  1 38  1  0  0  0  0
  3 39  1  1  0  0  0
  4 40  1  6  0  0  0
  5 41  1  0  0  0  0
  5 42  1  0  0  0  0
  5 43  1  0  0  0  0
  7 44  1  1  0  0  0
  9 45  1  0  0  0  0
  9 46  1  0  0  0  0
 11 47  1  0  0  0  0
 11 48  1  0  0  0  0
 12 49  1  1  0  0  0
 13 50  1  1  0  0  0
 14 51  1  0  0  0  0
 14 52  1  0  0  0  0
 14 53  1  0  0  0  0
 15 54  1  0  0  0  0
 15 55  1  0  0  0  0
 16 56  1  0  0  0  0
 16 57  1  0  0  0  0
 17 58  1  6  0  0  0
 19 59  1  0  0  0  0
 19 60  1  0  0  0  0
 20 61  1  0  0  0  0
 21 62  1  0  0  0  0
 21 63  1  0  0  0  0
 22 64  1  6  0  0  0
 23 65  1  0  0  0  0
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 27 71  1  0  0  0  0
 27 72  1  0  0  0  0
 31 73  1  0  0  0  0
 32 74  1  6  0  0  0
 33 75  1  0  0  0  0
 34 76  1  6  0  0  0
 35 77  1  0  0  0  0
M  END

     RDKit          3D

 77 81  0  0  0  0  0  0  0  0999 V2000
    5.5020    1.2751   -2.3150 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4841    0.6730   -1.5788 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9958   -0.3252   -0.7517 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5424   -0.0013    0.6659 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7695   -0.0221    1.5430 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6742   -0.9891    1.1349 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4542   -0.9416    0.3780 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8168    0.1918    0.5372 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6963    0.5690    1.0709 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5610   -0.0152    0.4979 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6983   -1.4660    0.6466 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0912   -1.8920    0.9976 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4500   -3.3190    0.7032 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7649   -3.9287   -0.4532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9747   -3.2339    0.5321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3068   -1.7228    0.5066 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0130   -1.2269    0.0176 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7718    0.2402   -0.1424 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0902    0.9515   -0.3187 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7309    0.4054   -1.4744 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9662    0.2897   -1.4536 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5582    0.4520   -0.9901 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4591    1.9193   -0.7420 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.0712   -2.3740   -1.4790 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2502   -1.6167   -1.1433 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4834   -2.5784   -0.1509 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2330    1.7236   -1.6098 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0028    0.5232   -2.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0438    2.1035   -2.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0882   -0.4478   -0.8340 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0654    0.9903    0.7476 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.6119   -0.6409    2.4627 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6442   -0.4714    1.0314 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9241   -1.8342    0.7533 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.1284    2.6253   -1.3208 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.8849    4.9768    1.4856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9865    4.4366   -0.9059 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4872    4.1187    0.0321 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6548    5.4924    0.5060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5716    1.8195    3.9504 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5584   -0.3651   -1.7148 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7662   -2.3447   -2.4310 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5715   -1.9866   -2.1218 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4357   -2.6362    0.1016 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
 10  9  1  1
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  6
 19 20  1  0
 18 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 25 26  1  0
 25 27  1  0
 24 28  1  0
 28 29  1  1
 29 30  2  0
 29 31  1  0
  7 32  1  0
 32 33  1  0
 32 34  1  0
 34 35  1  0
 34  3  1  0
 22 10  1  0
 28 10  1  0
 17 12  1  0
 28 18  1  0
  1 36  1  0
  1 37  1  0
  1 38  1  0
  3 39  1  1
  4 40  1  6
  5 41  1  0
  5 42  1  0
  5 43  1  0
  7 44  1  1
  9 45  1  0
  9 46  1  0
 11 47  1  0
 11 48  1  0
 12 49  1  1
 13 50  1  1
 14 51  1  0
 14 52  1  0
 14 53  1  0
 15 54  1  0
 15 55  1  0
 16 56  1  0
 16 57  1  0
 17 58  1  6
 19 59  1  0
 19 60  1  0
 20 61  1  0
 21 62  1  0
 21 63  1  0
 22 64  1  6
 23 65  1  0
 25 66  1  1
 26 67  1  0
 26 68  1  0
 26 69  1  0
 27 70  1  0
 27 71  1  0
 27 72  1  0
 31 73  1  0
 32 74  1  6
 33 75  1  0
 34 76  1  6
 35 77  1  0
M  END


  Mrv1652307012117493D          

 77 81  0  0  0  0            999 V2000
    5.5020    1.2751   -2.3150 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4841    0.6730   -1.5788 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9958   -0.3252   -0.7517 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5424   -0.0013    0.6659 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7695   -0.0221    1.5430 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6742   -0.9891    1.1349 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4542   -0.9416    0.3780 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8168    0.1918    0.5372 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6963    0.5690    1.0709 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5610   -0.0152    0.4979 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6983   -1.4660    0.6466 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.0912   -1.8920    0.9976 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4500   -3.3190    0.7032 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7649   -3.9287   -0.4532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9747   -3.2339    0.5321 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.3068   -1.7228    0.5066 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0130   -1.2269    0.0176 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7718    0.2402   -0.1424 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0902    0.9515   -0.3187 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.7309    0.4054   -1.4744 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9662    0.2897   -1.4536 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5582    0.4520   -0.9901 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4591    1.9193   -0.7420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2359    2.1379    0.3188 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4059    3.4765    0.9320 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8069    4.0180    0.9192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5653    4.4692    0.1307 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8115    0.8244    0.8046 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1974    0.9034    2.1919 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3668    0.6717    2.5649 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2738    1.2438    3.1476 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7832   -1.2599   -1.0933 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0712   -2.3740   -1.4790 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2502   -1.6167   -1.1433 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4834   -2.5784   -0.1509 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2330    1.7236   -1.6098 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0028    0.5232   -2.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0438    2.1035   -2.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0882   -0.4478   -0.8340 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0654    0.9903    0.7476 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0757    0.9794    1.8793 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6119   -0.6409    2.4627 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6442   -0.4714    1.0314 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9241   -1.8342    0.7533 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6641    0.4356    2.2146 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5952    1.7034    0.9503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2752   -2.0226   -0.1708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1107   -1.7519    1.5880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3079   -1.7390    2.0504 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2597   -3.9498    1.6051 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8235   -4.4265   -0.0775 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3640   -4.7507   -0.8987 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4605   -3.2708   -1.2621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1701   -3.6090   -0.4894 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5112   -3.7482    1.3256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1533   -1.6046   -0.2016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5826   -1.4954    1.5444 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8380   -1.8009   -0.9600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9880    2.0260   -0.5583 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7541    0.8629    0.5556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6918    0.6503   -1.3684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3682    1.1911   -1.9962 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1551   -0.5542   -2.1108 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2126    0.0155   -1.5642 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1284    2.6253   -1.3208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0057    3.4727    1.9853 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5026    3.2995    1.4027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1124    4.2050   -0.1130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8849    4.9768    1.4856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9865    4.4366   -0.9059 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4872    4.1187    0.0321 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6548    5.4924    0.5060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5716    1.8195    3.9504 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5584   -0.3651   -1.7148 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7662   -2.3447   -2.4310 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5715   -1.9866   -2.1218 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4357   -2.6362    0.1016 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
 10  9  1  1  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  6  0  0  0
 19 20  1  0  0  0  0
 18 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 24 28  1  0  0  0  0
 28 29  1  1  0  0  0
 29 30  2  0  0  0  0
 29 31  1  0  0  0  0
  7 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  1  0  0  0  0
 34 35  1  0  0  0  0
 34  3  1  0  0  0  0
 22 10  1  0  0  0  0
 28 10  1  0  0  0  0
 17 12  1  0  0  0  0
 28 18  1  0  0  0  0
  1 36  1  0  0  0  0
  1 37  1  0  0  0  0
  1 38  1  0  0  0  0
  3 39  1  1  0  0  0
  4 40  1  6  0  0  0
  5 41  1  0  0  0  0
  5 42  1  0  0  0  0
  5 43  1  0  0  0  0
  7 44  1  1  0  0  0
  9 45  1  0  0  0  0
  9 46  1  0  0  0  0
 11 47  1  0  0  0  0
 11 48  1  0  0  0  0
 12 49  1  1  0  0  0
 13 50  1  1  0  0  0
 14 51  1  0  0  0  0
 14 52  1  0  0  0  0
 14 53  1  0  0  0  0
 15 54  1  0  0  0  0
 15 55  1  0  0  0  0
 16 56  1  0  0  0  0
 16 57  1  0  0  0  0
 17 58  1  6  0  0  0
 19 59  1  0  0  0  0
 19 60  1  0  0  0  0
 20 61  1  0  0  0  0
 21 62  1  0  0  0  0
 21 63  1  0  0  0  0
 22 64  1  6  0  0  0
 23 65  1  0  0  0  0
 25 66  1  1  0  0  0
 26 67  1  0  0  0  0
 26 68  1  0  0  0  0
 26 69  1  0  0  0  0
 27 70  1  0  0  0  0
 27 71  1  0  0  0  0
 27 72  1  0  0  0  0
 31 73  1  0  0  0  0
 32 74  1  6  0  0  0
 33 75  1  0  0  0  0
 34 76  1  6  0  0  0
 35 77  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0004006

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)[C@]12C(=C([H])[C@]3([H])C([H])([H])[C@@]1(C([H])([H])O[H])[C@]1([H])C([H])([H])C([H])([H])[C@@]([H])(C([H])([H])[H])[C@@]1([H])C([H])([H])[C@]23C([H])([H])O[C@]1([H])O[C@@]([H])(C([H])([H])[H])[C@]([H])(OC([H])([H])[H])[C@@]([H])(O[H])[C@@]1([H])O[H])C([H])(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C27H42O8/c1-13(2)19-8-16-9-25(11-28)18-7-6-14(3)17(18)10-26(16,27(19,25)24(31)32)12-34-23-21(30)20(29)22(33-5)15(4)35-23/h8,13-18,20-23,28-30H,6-7,9-12H2,1-5H3,(H,31,32)/t14-,15+,16-,17-,18-,20+,21-,22+,23-,25-,26-,27-/m1/s1

> <INCHI_KEY>
YYTTUPKPVYPGSM-MAIXLWTKSA-N

> <FORMULA>
C27H42O8

> <MOLECULAR_WEIGHT>
494.625

> <EXACT_MASS>
494.287968312

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
77

> <JCHEM_AVERAGE_POLARIZABILITY>
53.33642936350088

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,2R,4R,5R,8R,9R,11S)-2-({[(2R,3R,4S,5R,6S)-3,4-dihydroxy-5-methoxy-6-methyloxan-2-yl]oxy}methyl)-9-(hydroxymethyl)-5-methyl-13-(propan-2-yl)tetracyclo[7.4.0.0^{2,11}.0^{4,8}]tridec-12-ene-1-carboxylic acid

> <ALOGPS_LOGP>
1.75

> <JCHEM_LOGP>
1.7924564679999988

> <ALOGPS_LOGS>
-3.27

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
12.278186658128314

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.240764670505094

> <JCHEM_PKA_STRONGEST_BASIC>
-2.7764435263053455

> <JCHEM_POLAR_SURFACE_AREA>
125.68000000000002

> <JCHEM_REFRACTIVITY>
127.50149999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.67e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,4R,5R,8R,9R,11S)-2-({[(2R,3R,4S,5R,6S)-3,4-dihydroxy-5-methoxy-6-methyloxan-2-yl]oxy}methyl)-9-(hydroxymethyl)-13-isopropyl-5-methyltetracyclo[7.4.0.0^{2,11}.0^{4,8}]tridec-12-ene-1-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 77 81  0  0  0  0  0  0  0  0999 V2000
    5.5020    1.2751   -2.3150 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4841    0.6730   -1.5788 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9958   -0.3252   -0.7517 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5424   -0.0013    0.6659 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7695   -0.0221    1.5430 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6742   -0.9891    1.1349 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4542   -0.9416    0.3780 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8168    0.1918    0.5372 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6963    0.5690    1.0709 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5610   -0.0152    0.4979 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6983   -1.4660    0.6466 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0912   -1.8920    0.9976 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4500   -3.3190    0.7032 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7649   -3.9287   -0.4532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9747   -3.2339    0.5321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3068   -1.7228    0.5066 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0130   -1.2269    0.0176 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7718    0.2402   -0.1424 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0902    0.9515   -0.3187 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7309    0.4054   -1.4744 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9662    0.2897   -1.4536 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5582    0.4520   -0.9901 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4591    1.9193   -0.7420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2359    2.1379    0.3188 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4059    3.4765    0.9320 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8069    4.0180    0.9192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5653    4.4692    0.1307 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8115    0.8244    0.8046 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1974    0.9034    2.1919 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3668    0.6717    2.5649 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2738    1.2438    3.1476 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7832   -1.2599   -1.0933 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0712   -2.3740   -1.4790 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2502   -1.6167   -1.1433 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4834   -2.5784   -0.1509 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2330    1.7236   -1.6098 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0028    0.5232   -2.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0438    2.1035   -2.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0882   -0.4478   -0.8340 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0654    0.9903    0.7476 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0757    0.9794    1.8793 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6119   -0.6409    2.4627 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6442   -0.4714    1.0314 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9241   -1.8342    0.7533 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6641    0.4356    2.2146 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5952    1.7034    0.9503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2752   -2.0226   -0.1708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1107   -1.7519    1.5880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3079   -1.7390    2.0504 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2597   -3.9498    1.6051 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8235   -4.4265   -0.0775 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3640   -4.7507   -0.8987 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4605   -3.2708   -1.2621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1701   -3.6090   -0.4894 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5112   -3.7482    1.3256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1533   -1.6046   -0.2016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5826   -1.4954    1.5444 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8380   -1.8009   -0.9600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9880    2.0260   -0.5583 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7541    0.8629    0.5556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6918    0.6503   -1.3684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3682    1.1911   -1.9962 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1551   -0.5542   -2.1108 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2126    0.0155   -1.5642 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1284    2.6253   -1.3208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0057    3.4727    1.9853 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5026    3.2995    1.4027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1124    4.2050   -0.1130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8849    4.9768    1.4856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9865    4.4366   -0.9059 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4872    4.1187    0.0321 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6548    5.4924    0.5060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5716    1.8195    3.9504 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5584   -0.3651   -1.7148 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7662   -2.3447   -2.4310 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5715   -1.9866   -2.1218 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4357   -2.6362    0.1016 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
 10  9  1  1
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  6
 19 20  1  0
 18 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 25 26  1  0
 25 27  1  0
 24 28  1  0
 28 29  1  1
 29 30  2  0
 29 31  1  0
  7 32  1  0
 32 33  1  0
 32 34  1  0
 34 35  1  0
 34  3  1  0
 22 10  1  0
 28 10  1  0
 17 12  1  0
 28 18  1  0
  1 36  1  0
  1 37  1  0
  1 38  1  0
  3 39  1  1
  4 40  1  6
  5 41  1  0
  5 42  1  0
  5 43  1  0
  7 44  1  1
  9 45  1  0
  9 46  1  0
 11 47  1  0
 11 48  1  0
 12 49  1  1
 13 50  1  1
 14 51  1  0
 14 52  1  0
 14 53  1  0
 15 54  1  0
 15 55  1  0
 16 56  1  0
 16 57  1  0
 17 58  1  6
 19 59  1  0
 19 60  1  0
 20 61  1  0
 21 62  1  0
 21 63  1  0
 22 64  1  6
 23 65  1  0
 25 66  1  1
 26 67  1  0
 26 68  1  0
 26 69  1  0
 27 70  1  0
 27 71  1  0
 27 72  1  0
 31 73  1  0
 32 74  1  6
 33 75  1  0
 34 76  1  6
 35 77  1  0
M  END

HEADER    PROTEIN                                 01-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-JUL-21         0                                  
HETATM    1  C   UNK     0       5.502   1.275  -2.315  0.00  0.00           C+0
HETATM    2  O   UNK     0       4.484   0.673  -1.579  0.00  0.00           O+0
HETATM    3  C   UNK     0       4.996  -0.325  -0.752  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.542  -0.001   0.666  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.769  -0.022   1.543  0.00  0.00           C+0
HETATM    6  O   UNK     0       3.674  -0.989   1.135  0.00  0.00           O+0
HETATM    7  C   UNK     0       2.454  -0.942   0.378  0.00  0.00           C+0
HETATM    8  O   UNK     0       1.817   0.192   0.537  0.00  0.00           O+0
HETATM    9  C   UNK     0       0.696   0.569   1.071  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.561  -0.015   0.498  0.00  0.00           C+0
HETATM   11  C   UNK     0      -0.698  -1.466   0.647  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.091  -1.892   0.998  0.00  0.00           C+0
HETATM   13  C   UNK     0      -2.450  -3.319   0.703  0.00  0.00           C+0
HETATM   14  C   UNK     0      -1.765  -3.929  -0.453  0.00  0.00           C+0
HETATM   15  C   UNK     0      -3.975  -3.234   0.532  0.00  0.00           C+0
HETATM   16  C   UNK     0      -4.307  -1.723   0.507  0.00  0.00           C+0
HETATM   17  C   UNK     0      -3.013  -1.227   0.018  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.772   0.240  -0.142  0.00  0.00           C+0
HETATM   19  C   UNK     0      -4.090   0.952  -0.319  0.00  0.00           C+0
HETATM   20  O   UNK     0      -4.731   0.405  -1.474  0.00  0.00           O+0
HETATM   21  C   UNK     0      -1.966   0.290  -1.454  0.00  0.00           C+0
HETATM   22  C   UNK     0      -0.558   0.452  -0.990  0.00  0.00           C+0
HETATM   23  C   UNK     0      -0.459   1.919  -0.742  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.236   2.138   0.319  0.00  0.00           C+0
HETATM   25  C   UNK     0      -1.406   3.477   0.932  0.00  0.00           C+0
HETATM   26  C   UNK     0      -2.807   4.018   0.919  0.00  0.00           C+0
HETATM   27  C   UNK     0      -0.565   4.469   0.131  0.00  0.00           C+0
HETATM   28  C   UNK     0      -1.812   0.824   0.805  0.00  0.00           C+0
HETATM   29  C   UNK     0      -2.197   0.903   2.192  0.00  0.00           C+0
HETATM   30  O   UNK     0      -3.367   0.672   2.565  0.00  0.00           O+0
HETATM   31  O   UNK     0      -1.274   1.244   3.148  0.00  0.00           O+0
HETATM   32  C   UNK     0       2.783  -1.260  -1.093  0.00  0.00           C+0
HETATM   33  O   UNK     0       2.071  -2.374  -1.479  0.00  0.00           O+0
HETATM   34  C   UNK     0       4.250  -1.617  -1.143  0.00  0.00           C+0
HETATM   35  O   UNK     0       4.483  -2.578  -0.151  0.00  0.00           O+0
HETATM   36  H   UNK     0       6.233   1.724  -1.610  0.00  0.00           H+0
HETATM   37  H   UNK     0       6.003   0.523  -2.964  0.00  0.00           H+0
HETATM   38  H   UNK     0       5.044   2.103  -2.891  0.00  0.00           H+0
HETATM   39  H   UNK     0       6.088  -0.448  -0.834  0.00  0.00           H+0
HETATM   40  H   UNK     0       4.065   0.990   0.748  0.00  0.00           H+0
HETATM   41  H   UNK     0       6.076   0.979   1.879  0.00  0.00           H+0
HETATM   42  H   UNK     0       5.612  -0.641   2.463  0.00  0.00           H+0
HETATM   43  H   UNK     0       6.644  -0.471   1.031  0.00  0.00           H+0
HETATM   44  H   UNK     0       1.924  -1.834   0.753  0.00  0.00           H+0
HETATM   45  H   UNK     0       0.664   0.436   2.215  0.00  0.00           H+0
HETATM   46  H   UNK     0       0.595   1.703   0.950  0.00  0.00           H+0
HETATM   47  H   UNK     0      -0.275  -2.023  -0.171  0.00  0.00           H+0
HETATM   48  H   UNK     0      -0.111  -1.752   1.588  0.00  0.00           H+0
HETATM   49  H   UNK     0      -2.308  -1.739   2.050  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.260  -3.950   1.605  0.00  0.00           H+0
HETATM   51  H   UNK     0      -0.824  -4.426  -0.078  0.00  0.00           H+0
HETATM   52  H   UNK     0      -2.364  -4.751  -0.899  0.00  0.00           H+0
HETATM   53  H   UNK     0      -1.460  -3.271  -1.262  0.00  0.00           H+0
HETATM   54  H   UNK     0      -4.170  -3.609  -0.489  0.00  0.00           H+0
HETATM   55  H   UNK     0      -4.511  -3.748   1.326  0.00  0.00           H+0
HETATM   56  H   UNK     0      -5.153  -1.605  -0.202  0.00  0.00           H+0
HETATM   57  H   UNK     0      -4.583  -1.495   1.544  0.00  0.00           H+0
HETATM   58  H   UNK     0      -2.838  -1.801  -0.960  0.00  0.00           H+0
HETATM   59  H   UNK     0      -3.988   2.026  -0.558  0.00  0.00           H+0
HETATM   60  H   UNK     0      -4.754   0.863   0.556  0.00  0.00           H+0
HETATM   61  H   UNK     0      -5.692   0.650  -1.368  0.00  0.00           H+0
HETATM   62  H   UNK     0      -2.368   1.191  -1.996  0.00  0.00           H+0
HETATM   63  H   UNK     0      -2.155  -0.554  -2.111  0.00  0.00           H+0
HETATM   64  H   UNK     0       0.213   0.016  -1.564  0.00  0.00           H+0
HETATM   65  H   UNK     0       0.128   2.625  -1.321  0.00  0.00           H+0
HETATM   66  H   UNK     0      -1.006   3.473   1.985  0.00  0.00           H+0
HETATM   67  H   UNK     0      -3.503   3.300   1.403  0.00  0.00           H+0
HETATM   68  H   UNK     0      -3.112   4.205  -0.113  0.00  0.00           H+0
HETATM   69  H   UNK     0      -2.885   4.977   1.486  0.00  0.00           H+0
HETATM   70  H   UNK     0      -0.987   4.437  -0.906  0.00  0.00           H+0
HETATM   71  H   UNK     0       0.487   4.119   0.032  0.00  0.00           H+0
HETATM   72  H   UNK     0      -0.655   5.492   0.506  0.00  0.00           H+0
HETATM   73  H   UNK     0      -1.572   1.819   3.950  0.00  0.00           H+0
HETATM   74  H   UNK     0       2.558  -0.365  -1.715  0.00  0.00           H+0
HETATM   75  H   UNK     0       1.766  -2.345  -2.431  0.00  0.00           H+0
HETATM   76  H   UNK     0       4.572  -1.987  -2.122  0.00  0.00           H+0
HETATM   77  H   UNK     0       5.436  -2.636   0.102  0.00  0.00           H+0
CONECT    1    2   36   37   38                                             
CONECT    2    1    3                                                       
CONECT    3    2    4   34   39                                             
CONECT    4    3    5    6   40                                             
CONECT    5    4   41   42   43                                             
CONECT    6    4    7                                                       
CONECT    7    6    8   32   44                                             
CONECT    8    7    9                                                       
CONECT    9    8   10   45   46                                             
CONECT   10    9   11   22   28                                             
CONECT   11   10   12   47   48                                             
CONECT   12   11   13   17   49                                             
CONECT   13   12   14   15   50                                             
CONECT   14   13   51   52   53                                             
CONECT   15   13   16   54   55                                             
CONECT   16   15   17   56   57                                             
CONECT   17   16   18   12   58                                             
CONECT   18   17   19   21   28                                             
CONECT   19   18   20   59   60                                             
CONECT   20   19   61                                                       
CONECT   21   18   22   62   63                                             
CONECT   22   21   23   10   64                                             
CONECT   23   22   24   65                                                  
CONECT   24   23   25   28                                                  
CONECT   25   24   26   27   66                                             
CONECT   26   25   67   68   69                                             
CONECT   27   25   70   71   72                                             
CONECT   28   24   29   10   18                                             
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   73                                                       
CONECT   32    7   33   34   74                                             
CONECT   33   32   75                                                       
CONECT   34   32   35    3   76                                             
CONECT   35   34   77                                                       
CONECT   36    1                                                            
CONECT   37    1                                                            
CONECT   38    1                                                            
CONECT   39    3                                                            
CONECT   40    4                                                            
CONECT   41    5                                                            
CONECT   42    5                                                            
CONECT   43    5                                                            
CONECT   44    7                                                            
CONECT   45    9                                                            
CONECT   46    9                                                            
CONECT   47   11                                                            
CONECT   48   11                                                            
CONECT   49   12                                                            
CONECT   50   13                                                            
CONECT   51   14                                                            
CONECT   52   14                                                            
CONECT   53   14                                                            
CONECT   54   15                                                            
CONECT   55   15                                                            
CONECT   56   16                                                            
CONECT   57   16                                                            
CONECT   58   17                                                            
CONECT   59   19                                                            
CONECT   60   19                                                            
CONECT   61   20                                                            
CONECT   62   21                                                            
CONECT   63   21                                                            
CONECT   64   22                                                            
CONECT   65   23                                                            
CONECT   66   25                                                            
CONECT   67   26                                                            
CONECT   68   26                                                            
CONECT   69   26                                                            
CONECT   70   27                                                            
CONECT   71   27                                                            
CONECT   72   27                                                            
CONECT   73   31                                                            
CONECT   74   32                                                            
CONECT   75   33                                                            
CONECT   76   34                                                            
CONECT   77   35                                                            
MASTER        0    0    0    0    0    0    0    0   77    0  162    0
END

RDKit          3D

77 81  0  0  0  0  0  0  0  0999 V2000
    5.5020    1.2751   -2.3150 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4841    0.6730   -1.5788 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9958   -0.3252   -0.7517 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5424   -0.0013    0.6659 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7695   -0.0221    1.5430 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6742   -0.9891    1.1349 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4542   -0.9416    0.3780 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8168    0.1918    0.5372 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6963    0.5690    1.0709 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5610   -0.0152    0.4979 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6983   -1.4660    0.6466 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0912   -1.8920    0.9976 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4500   -3.3190    0.7032 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7649   -3.9287   -0.4532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9747   -3.2339    0.5321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3068   -1.7228    0.5066 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0130   -1.2269    0.0176 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7718    0.2402   -0.1424 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0902    0.9515   -0.3187 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7309    0.4054   -1.4744 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9662    0.2897   -1.4536 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5582    0.4520   -0.9901 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4591    1.9193   -0.7420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2359    2.1379    0.3188 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4059    3.4765    0.9320 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8069    4.0180    0.9192 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5653    4.4692    0.1307 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8115    0.8244    0.8046 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -2.2597   -3.9498    1.6051 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8235   -4.4265   -0.0775 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3640   -4.7507   -0.8987 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4605   -3.2708   -1.2621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1701   -3.6090   -0.4894 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5112   -3.7482    1.3256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1533   -1.6046   -0.2016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5826   -1.4954    1.5444 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8380   -1.8009   -0.9600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9880    2.0260   -0.5583 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7541    0.8629    0.5556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6918    0.6503   -1.3684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3682    1.1911   -1.9962 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1551   -0.5542   -2.1108 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2126    0.0155   -1.5642 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1284    2.6253   -1.3208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0057    3.4727    1.9853 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5026    3.2995    1.4027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1124    4.2050   -0.1130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8849    4.9768    1.4856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9865    4.4366   -0.9059 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4872    4.1187    0.0321 H   0  0  0  0  0  0  0  0  0  0  0  0
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    4.5715   -1.9866   -2.1218 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4357   -2.6362    0.1016 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
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M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
(4R,5R,8R)-2-{[(3,4-dihydroxy-5-methoxy-6-methyloxan-2-yl)oxy]methyl}-9-(hydroxymethyl)-5-methyl-13-(propan-2-yl)tetracyclo[7.4.0.0,.0,]tridec-12-ene-1-carboxylate	Generator

Chemical Formula

C₂₇H₄₂O₈

Average Mass

494.6250 Da

Monoisotopic Mass

494.28797 Da

IUPAC Name

(1R,2R,4R,5R,8R,9R,11S)-2-({[(2R,3R,4S,5R,6S)-3,4-dihydroxy-5-methoxy-6-methyloxan-2-yl]oxy}methyl)-9-(hydroxymethyl)-5-methyl-13-(propan-2-yl)tetracyclo[7.4.0.0^{2,11}.0^{4,8}]tridec-12-ene-1-carboxylic acid

Traditional Name

(1R,2R,4R,5R,8R,9R,11S)-2-({[(2R,3R,4S,5R,6S)-3,4-dihydroxy-5-methoxy-6-methyloxan-2-yl]oxy}methyl)-9-(hydroxymethyl)-13-isopropyl-5-methyltetracyclo[7.4.0.0^{2,11}.0^{4,8}]tridec-12-ene-1-carboxylic acid

CAS Registry Number

Not Available

SMILES

COC1C(C)OC(OCC23C[C@@H]4[C@H](C)CC[C@H]4C4(CO)CC2C=C(C(C)C)C34C(O)=O)C(O)C1O

InChI Identifier

InChI=1S/C27H42O8/c1-13(2)19-8-16-9-25(11-28)18-7-6-14(3)17(18)10-26(16,27(19,25)24(31)32)12-34-23-21(30)20(29)22(33-5)15(4)35-23/h8,13-18,20-23,28-30H,6-7,9-12H2,1-5H3,(H,31,32)/t14-,15?,16?,17-,18-,20?,21?,22?,23?,25?,26?,27?/m1/s1

InChI Key

YYTTUPKPVYPGSM-MAIXLWTKSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Mortierella isabellina ATCC38063	Fungi	KNApSAcK
Streptomyces	NPAtlas	11827037

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.75	ALOGPS
logP	1.79	ChemAxon
logS	-3.3	ALOGPS
pKa (Strongest Acidic)	4.24	ChemAxon
pKa (Strongest Basic)	-2.8	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	125.68 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	127.5 m³·mol⁻¹	ChemAxon
Polarizability	53.34 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

NPAtlas ID

NPA019287

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78445456

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139588473

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Hall RM, Dawson MJ, Jones CA, Roberts AD, Sidebottom PJ, Stead P, Taylor NL: The production of novel sordarin analogues by biotransformation. J Antibiot (Tokyo). 2001 Nov;54(11):948-57. doi: 10.7164/antibiotics.54.948. [PubMed:11827037 ]

Showing NP-Card for 3-Deformyl-3-hydroxymethyl sordarin (NP0004006)

MOL for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

3D MOL for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

3D SDF for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

3D-SDF for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

PDB for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

3D PDB for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

SMILES for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

INCHI for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

Structure for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)

3D Structure for NP0004006 (3-Deformyl-3-hydroxymethyl sordarin)