Np mrd loader

Record Information
Version1.0
Created at2020-12-09 01:29:40 UTC
Updated at2021-07-15 16:47:51 UTC
NP-MRD IDNP0003961
Secondary Accession NumbersNone
Natural Product Identification
Common NameMemnopeptide A
Provided ByNPAtlasNPAtlas Logo
Description Memnopeptide A is found in Memnoniella and Memnoniella echinata. It was first documented in 2001 (PMID: 11776431). Based on a literature review very few articles have been published on 1-{1-[2-({[1-(2-{[2-({[1-(2-{[2-({2-[(2R,2'R,4'aS,6'R,8'aS)-4,6'-dihydroxy-2',5',5',8'a-tetramethyl-6-oxo-3,3',4',4'a,5',6,6',7,7',8,8',8'a-dodecahydro-2'H-spiro[furo[2,3-e]isoindole-2,1'-naphthalene]-7-yl]-1-hydroxy-4-methanesulfinylbutylidene}amino)-1-hydroxy-3-(1H-imidazol-5-yl)propylidene]amino}-4-(C-hydroxycarbonimidoyl)butanoyl)pyrrolidin-2-yl](hydroxy)methylidene}amino)-1-hydroxy-3-(1H-imidazol-5-yl)propylidene]amino}-4-(C-hydroxycarbonimidoyl)butanoyl)pyrrolidin-2-yl](hydroxy)methylidene}amino)-4-methylpentanoyl]pyrrolidine-2-carbonyl}pyrrolidine-2-carboxylic acid.
Structure
Thumb
Synonyms
ValueSource
1-{1-[2-({[1-(2-{[2-({[1-(2-{[2-({2-[(2R,2'r,4'as,6'r,8'as)-4,6'-dihydroxy-2',5',5',8'a-tetramethyl-6-oxo-3,3',4',4'a,5',6,6',7,7',8,8',8'a-dodecahydro-2'H-spiro[furo[2,3-e]isoindole-2,1'-naphthalene]-7-yl]-1-hydroxy-4-methanesulfinylbutylidene}amino)-1-hydroxy-3-(1H-imidazol-5-yl)propylidene]amino}-4-(C-hydroxycarbonimidoyl)butanoyl)pyrrolidin-2-yl](hydroxy)methylidene}amino)-1-hydroxy-3-(1H-imidazol-5-yl)propylidene]amino}-4-(C-hydroxycarbonimidoyl)butanoyl)pyrrolidin-2-yl](hydroxy)methylidene}amino)-4-methylpentanoyl]pyrrolidine-2-carbonyl}pyrrolidine-2-carboxylateGenerator
1-{1-[2-({[1-(2-{[2-({[1-(2-{[2-({2-[(2R,2'r,4'as,6'r,8'as)-4,6'-dihydroxy-2',5',5',8'a-tetramethyl-6-oxo-3,3',4',4'a,5',6,6',7,7',8,8',8'a-dodecahydro-2'H-spiro[furo[2,3-e]isoindole-2,1'-naphthalene]-7-yl]-1-hydroxy-4-methanesulphinylbutylidene}amino)-1-hydroxy-3-(1H-imidazol-5-yl)propylidene]amino}-4-(C-hydroxycarbonimidoyl)butanoyl)pyrrolidin-2-yl](hydroxy)methylidene}amino)-1-hydroxy-3-(1H-imidazol-5-yl)propylidene]amino}-4-(C-hydroxycarbonimidoyl)butanoyl)pyrrolidin-2-yl](hydroxy)methylidene}amino)-4-methylpentanoyl]pyrrolidine-2-carbonyl}pyrrolidine-2-carboxylateGenerator
1-{1-[2-({[1-(2-{[2-({[1-(2-{[2-({2-[(2R,2'r,4'as,6'r,8'as)-4,6'-dihydroxy-2',5',5',8'a-tetramethyl-6-oxo-3,3',4',4'a,5',6,6',7,7',8,8',8'a-dodecahydro-2'H-spiro[furo[2,3-e]isoindole-2,1'-naphthalene]-7-yl]-1-hydroxy-4-methanesulphinylbutylidene}amino)-1-hydroxy-3-(1H-imidazol-5-yl)propylidene]amino}-4-(C-hydroxycarbonimidoyl)butanoyl)pyrrolidin-2-yl](hydroxy)methylidene}amino)-1-hydroxy-3-(1H-imidazol-5-yl)propylidene]amino}-4-(C-hydroxycarbonimidoyl)butanoyl)pyrrolidin-2-yl](hydroxy)methylidene}amino)-4-methylpentanoyl]pyrrolidine-2-carbonyl}pyrrolidine-2-carboxylic acidGenerator
Chemical FormulaC76H108N16O18S
Average Mass1565.8500 Da
Monoisotopic Mass1564.77482 Da
IUPAC Name(2S)-1-[(2S)-1-[(2R)-2-{[(2S)-1-[(2R)-2-[(2S)-2-{[(2R)-1-[(2R)-2-[(2S)-2-[(2S)-2-[(2R,2'R,4'aS,6'R,8'aS)-4,6'-dihydroxy-2',5',5',8'a-tetramethyl-6-oxo-3,3',4',4'a,5',6,6',7,7',8,8',8'a-dodecahydro-2'H-spiro[furo[2,3-e]isoindole-2,1'-naphthalene]-7-yl]-4-[(R)-methanesulfinyl]butanamido]-3-(1H-imidazol-5-yl)propanamido]-4-carbamoylbutanoyl]pyrrolidin-2-yl]formamido}-3-(1H-imidazol-5-yl)propanamido]-4-carbamoylbutanoyl]pyrrolidin-2-yl]formamido}-4-methylpentanoyl]pyrrolidine-2-carbonyl]pyrrolidine-2-carboxylic acid
Traditional Name(2S)-1-[(2S)-1-[(2R)-2-{[(2S)-1-[(2R)-2-[(2S)-2-{[(2R)-1-[(2R)-2-[(2S)-2-[(2S)-2-[(2R,2'R,4'aS,6'R,8'aS)-4,6'-dihydroxy-2',5',5',8'a-tetramethyl-6-oxo-3,3',4',4'a,6',7',8,8'-octahydro-2'H-spiro[furo[2,3-e]isoindole-2,1'-naphthalene]-7-yl]-4-[(R)-methanesulfinyl]butanamido]-3-(3H-imidazol-4-yl)propanamido]-4-carbamoylbutanoyl]pyrrolidin-2-yl]formamido}-3-(3H-imidazol-4-yl)propanamido]-4-carbamoylbutanoyl]pyrrolidin-2-yl]formamido}-4-methylpentanoyl]pyrrolidine-2-carbonyl]pyrrolidine-2-carboxylic acid
CAS Registry NumberNot Available
SMILES
CC(C)CC(NC(=O)C1CCCN1C(=O)C(CCC(N)=O)NC(=O)C(CC1=CN=CN1)NC(=O)C1CCCN1C(=O)C(CCC(N)=O)NC(=O)C(CC1=CN=CN1)NC(=O)C(CCS(C)=O)N1CC2=C3O[C@]4(CC3=C(O)C=C2C1=O)[C@H](C)CC[C@H]1C(C)(C)[C@H](O)CC[C@]41C)C(=O)N1CCCC1C(=O)N1CCCC1C(O)=O
InChI Identifier
InChI=1S/C76H108N16O18S/c1-40(2)30-51(71(105)90-27-10-14-55(90)72(106)91-28-11-15-56(91)73(107)108)87-66(100)53-13-9-26-89(53)70(104)48(18-21-61(78)96)83-63(97)49(31-42-35-79-38-81-42)85-65(99)52-12-8-25-88(52)69(103)47(17-20-60(77)95)84-64(98)50(32-43-36-80-39-82-43)86-67(101)54(23-29-111(7)109)92-37-46-44(68(92)102)33-57(93)45-34-76(110-62(45)46)41(3)16-19-58-74(4,5)59(94)22-24-75(58,76)6/h33,35-36,38-41,47-56,58-59,93-94H,8-32,34,37H2,1-7H3,(H2,77,95)(H2,78,96)(H,79,81)(H,80,82)(H,83,97)(H,84,98)(H,85,99)(H,86,101)(H,87,100)(H,107,108)/t41-,47?,48?,49?,50?,51?,52?,53?,54?,55?,56?,58+,59-,75+,76-,111?/m1/s1
InChI KeyGRBLBISGALXJDT-LHTGWLQBSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
MemnoniellaNPAtlas
Memnoniella echinataLOTUS Database
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.18ALOGPS
logP-5.7ChemAxon
logS-4ALOGPS
pKa (Strongest Acidic)3.77ChemAxon
pKa (Strongest Basic)7.04ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count20ChemAxon
Hydrogen Donor Count12ChemAxon
Polar Surface Area494.65 ŲChemAxon
Rotatable Bond Count31ChemAxon
Refractivity401.85 m³·mol⁻¹ChemAxon
Polarizability167.78 ųChemAxon
Number of Rings11ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA007293
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78445404
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139585138
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Vertesy L, Kogler H, Markus A, Schiell M, Vogel M, Wink J: Memnopeptide A, a novel terpene peptide from Memnoniella with an activating effect on SERCA2. J Antibiot (Tokyo). 2001 Oct;54(10):771-82. doi: 10.7164/antibiotics.54.771. [PubMed:11776431 ]