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Record Information
Version1.0
Created at2020-12-09 00:49:01 UTC
Updated at2021-07-15 16:46:54 UTC
NP-MRD IDNP0003618
Secondary Accession NumbersNone
Natural Product Identification
Common NameIC202D
Provided ByNPAtlasNPAtlas Logo
Description3-[(5-Aminopentyl)(hydroxy)carbamoyl]-N-(5-{N-hydroxy-3-[(5-oxopentyl)-C-hydroxycarbonimidoyl]propanamido}pentyl)propanimidic acid belongs to the class of organic compounds known as n-acyl amines. N-acyl amines are compounds containing a fatty acid moiety linked to an amine group through an ester linkage. IC202D is found in Streptoalloteichus. It was first documented in 2000 (PMID: 11217808). Based on a literature review very few articles have been published on 3-[(5-aminopentyl)(hydroxy)carbamoyl]-N-(5-{N-hydroxy-3-[(5-oxopentyl)-C-hydroxycarbonimidoyl]propanamido}pentyl)propanimidic acid.
Structure
Thumb
Synonyms
ValueSource
3-[(5-Aminopentyl)(hydroxy)carbamoyl]-N-(5-{n-hydroxy-3-[(5-oxopentyl)-C-hydroxycarbonimidoyl]propanamido}pentyl)propanimidateGenerator
Chemical FormulaC23H43N5O7
Average Mass501.6250 Da
Monoisotopic Mass501.31625 Da
IUPAC NameN-(5-aminopentyl)-N-hydroxy-N'-(5-{N-hydroxy-3-[(5-oxopentyl)carbamoyl]propanamido}pentyl)butanediamide
Traditional NameN-(5-aminopentyl)-N-hydroxy-N'-(5-{N-hydroxy-3-[(5-oxopentyl)carbamoyl]propanamido}pentyl)succinamide
CAS Registry NumberNot Available
SMILES
NCCCCCN(O)C(=O)CCC(=O)NCCCCCN(O)C(=O)CCC(=O)NCCCCC=O
InChI Identifier
InChI=1S/C23H43N5O7/c24-14-4-1-7-17-27(34)22(32)12-10-20(30)25-15-5-2-8-18-28(35)23(33)13-11-21(31)26-16-6-3-9-19-29/h19,34-35H,1-18,24H2,(H,25,30)(H,26,31)
InChI KeyYIZLWMLZIYPRLH-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
StreptoalloteichusNPAtlas
Chemical Taxonomy
Description Belongs to the class of organic compounds known as n-acyl amines. N-acyl amines are compounds containing a fatty acid moiety linked to an amine group through an ester linkage.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty amides
Direct ParentN-acyl amines
Alternative Parents
Substituents
  • N-acyl-amine
  • Alpha-hydrogen aldehyde
  • Amino acid or derivatives
  • Carboxamide group
  • Secondary carboxylic acid amide
  • Hydroxamic acid
  • Carboxylic acid derivative
  • Aldehyde
  • Organonitrogen compound
  • Organooxygen compound
  • Primary aliphatic amine
  • Primary amine
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organic oxygen compound
  • Amine
  • Organic nitrogen compound
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.25ALOGPS
logP-3.1ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)8.08ChemAxon
pKa (Strongest Basic)10.22ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area182.37 ŲChemAxon
Rotatable Bond Count22ChemAxon
Refractivity130.9 m³·mol⁻¹ChemAxon
Polarizability55.45 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA007325
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8752748
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10577363
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Iijima M, Someno T, Amemiya M, Ishizuka M, Naganawa H, Takeuchi T: Biosynthesis of IC202C, a new siderophore with immunosuppressive activity. J Antibiot (Tokyo). 2000 Dec;53(12):1411-5. doi: 10.7164/antibiotics.53.1411. [PubMed:11217808 ]