Np mrd loader

Record Information
Version1.0
Created at2020-12-09 00:47:41 UTC
Updated at2021-07-15 16:46:48 UTC
NP-MRD IDNP0003584
Secondary Accession NumbersNone
Natural Product Identification
Common NameIsomalyngamide A
Provided ByNPAtlasNPAtlas Logo
Description Isomalyngamide A is found in Lyngbya majuscula. It was first documented in 2000 (PMID: 11141095). Based on a literature review very few articles have been published on (4E,7S)-N-[(4E)-2-(chloromethylidene)-4-methoxy-6-(4-methoxy-2-oxo-2,5-dihydro-1H-pyrrol-1-yl)-6-oxohex-4-en-1-yl]-7-methoxy-N-methyltetradec-4-enamide (PMID: 31629398) (PMID: 26775951) (PMID: 23644200) (PMID: 21676505) (PMID: 20658384).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC29H45ClN2O6
Average Mass553.1400 Da
Monoisotopic Mass552.29661 Da
IUPAC Name(4E,7S)-N-[(2Z,4E)-2-(chloromethylidene)-4-methoxy-6-(4-methoxy-2-oxo-2,5-dihydro-1H-pyrrol-1-yl)-6-oxohex-4-en-1-yl]-7-methoxy-N-methyltetradec-4-enamide
Traditional Name(4E,7S)-N-[(2Z,4E)-2-(chloromethylidene)-4-methoxy-6-(4-methoxy-2-oxo-5H-pyrrol-1-yl)-6-oxohex-4-en-1-yl]-7-methoxy-N-methyltetradec-4-enamide
CAS Registry NumberNot Available
SMILES
CCCCCCC[C@@H](C\C=C\CCC(=O)N(C)C\C(C\C(OC)=C/C(=O)N1CC(OC)=CC1=O)=C/Cl)OC
InChI Identifier
InChI=1S/C29H45ClN2O6/c1-6-7-8-9-11-14-24(36-3)15-12-10-13-16-27(33)31(2)21-23(20-30)17-25(37-4)18-28(34)32-22-26(38-5)19-29(32)35/h10,12,18-20,24H,6-9,11,13-17,21-22H2,1-5H3/b12-10+,23-20-,25-18+/t24-/m0/s1
InChI KeyMCGPGUSLTPAGCR-DINDZMPHSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Lyngbya majusculaNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.78ALOGPS
logP3.72ChemAxon
logS-5.9ALOGPS
pKa (Strongest Acidic)9.32ChemAxon
pKa (Strongest Basic)-0.73ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area85.38 ŲChemAxon
Rotatable Bond Count19ChemAxon
Refractivity155.4 m³·mol⁻¹ChemAxon
Polarizability62.56 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA010008
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8801916
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10626553
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Kan Y, Sakamoto B, Fujita T, Nagai H: New malyngamides from the Hawaiian cyanobacterium Lyngbya majuscula. J Nat Prod. 2000 Dec;63(12):1599-602. doi: 10.1021/np000250t. [PubMed:11141095 ]
  2. Shih CY, Chang TT, Chen CL, Li WS: Antiangiogenic Effect of Isomalyngamide A Riboside CY01 in Breast Cancer Cells via Inhibition of Migration, Tube Formation and pVEGFR2/pAKT Signals. Anticancer Agents Med Chem. 2020;20(3):386-399. doi: 10.2174/1871520619666191019123244. [PubMed:31629398 ]
  3. Dussault D, Vu KD, Vansach T, Horgen FD, Lacroix M: Antimicrobial effects of marine algal extracts and cyanobacterial pure compounds against five foodborne pathogens. Food Chem. 2016 May 15;199:114-8. doi: 10.1016/j.foodchem.2015.11.119. Epub 2015 Nov 26. [PubMed:26775951 ]
  4. More SV, Chang TT, Chiao YP, Jao SC, Lu CK, Li WS: Glycosylation enhances the anti-migratory activities of isomalyngamide A analogs. Eur J Med Chem. 2013 Jun;64:169-78. doi: 10.1016/j.ejmech.2013.03.044. Epub 2013 Apr 6. [PubMed:23644200 ]
  5. Chang TT, More SV, Lu IH, Hsu JC, Chen TJ, Jen YC, Lu CK, Li WS: Isomalyngamide A, A-1 and their analogs suppress cancer cell migration in vitro. Eur J Med Chem. 2011 Sep;46(9):3810-9. doi: 10.1016/j.ejmech.2011.05.049. Epub 2011 May 27. [PubMed:21676505 ]
  6. Tan LT, Goh BP, Tripathi A, Lim MG, Dickinson GH, Lee SS, Teo SL: Natural antifoulants from the marine cyanobacterium Lyngbya majuscula. Biofouling. 2010 Aug;26(6):685-95. doi: 10.1080/08927014.2010.508343. [PubMed:20658384 ]