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Record Information
Version1.0
Created at2020-12-09 00:41:14 UTC
Updated at2021-07-15 16:46:24 UTC
NP-MRD IDNP0003429
Secondary Accession NumbersNone
Natural Product Identification
Common NameKodaistatin C
Provided ByNPAtlasNPAtlas Logo
Description(5Z)-3-(2-{5-acetyl-2-[(3E,5E)-5,7-dimethyl-2-oxonona-3,5-dien-1-yl]-4,5-dihydroxy-3-oxocyclopent-1-en-1-yl}-4,5-dihydroxyphenyl)-5-[(3,4-dihydroxyphenyl)methylidene]-4-hydroxy-2,5-dihydrofuran-2-one belongs to the class of organic compounds known as catechols. Catechols are compounds containing a 1,2-benzenediol moiety. Kodaistatin C is found in Aspergillus and Aspergillus terreus Thom DSM 11247 . It was first documented in 2000 (PMID: 10994809). Based on a literature review very few articles have been published on (5Z)-3-(2-{5-acetyl-2-[(3E,5E)-5,7-dimethyl-2-oxonona-3,5-dien-1-yl]-4,5-dihydroxy-3-oxocyclopent-1-en-1-yl}-4,5-dihydroxyphenyl)-5-[(3,4-dihydroxyphenyl)methylidene]-4-hydroxy-2,5-dihydrofuran-2-one.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC35H34O12
Average Mass646.6450 Da
Monoisotopic Mass646.20503 Da
IUPAC Name(5Z)-3-{2-[(4R,5R)-5-acetyl-2-[(3E,5E,7R)-5,7-dimethyl-2-oxonona-3,5-dien-1-yl]-4,5-dihydroxy-3-oxocyclopent-1-en-1-yl]-4,5-dihydroxyphenyl}-5-[(3,4-dihydroxyphenyl)methylidene]-4-hydroxy-2,5-dihydrofuran-2-one
Traditional Name(5Z)-3-{2-[(4R,5R)-5-acetyl-2-[(3E,5E,7R)-5,7-dimethyl-2-oxonona-3,5-dien-1-yl]-4,5-dihydroxy-3-oxocyclopent-1-en-1-yl]-4,5-dihydroxyphenyl}-5-[(3,4-dihydroxyphenyl)methylidene]-4-hydroxyfuran-2-one
CAS Registry NumberNot Available
SMILES
CCC(C)\C=C(/C)\C=C\C(=O)CC1=C(C2=CC(O)=C(O)C=C2C2=C(O)\C(OC2=O)=C\C2=CC(O)=C(O)C=C2)C(O)(C(O)C1=O)C(C)=O
InChI Identifier
InChI=1S/C35H34O12/c1-5-16(2)10-17(3)6-8-20(37)13-23-30(35(46,18(4)36)33(44)31(23)42)22-15-27(41)26(40)14-21(22)29-32(43)28(47-34(29)45)12-19-7-9-24(38)25(39)11-19/h6-12,14-16,33,38-41,43-44,46H,5,13H2,1-4H3/b8-6+,17-10+,28-12-
InChI KeyKFMTUTLQSGURRM-MARNYXESSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
AspergillusNPAtlas
Aspergillus terreus Thom DSM 11247Fungi
Chemical Taxonomy
Description Belongs to the class of organic compounds known as catechols. Catechols are compounds containing a 1,2-benzenediol moiety.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenols
Sub ClassBenzenediols
Direct ParentCatechols
Alternative Parents
Substituents
  • Catechol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Monocyclic benzene moiety
  • 2-furanone
  • Acryloyl-group
  • Alpha-hydroxy ketone
  • Vinylogous acid
  • Alpha,beta-unsaturated ketone
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Dihydrofuran
  • Tertiary alcohol
  • Enol ester
  • Enone
  • 1,2-diol
  • Carboxylic acid ester
  • Cyclic ketone
  • Secondary alcohol
  • Ketone
  • Lactone
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Oxacycle
  • Enol
  • Monocarboxylic acid or derivatives
  • Alcohol
  • Organic oxygen compound
  • Carbonyl group
  • Organic oxide
  • Organooxygen compound
  • Hydrocarbon derivative
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.86ALOGPS
logP3.91ChemAxon
logS-4.5ALOGPS
pKa (Strongest Acidic)6.38ChemAxon
pKa (Strongest Basic)-4.1ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count11ChemAxon
Hydrogen Donor Count7ChemAxon
Polar Surface Area219.12 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity174.33 m³·mol⁻¹ChemAxon
Polarizability65.47 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA007177
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78444068
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound54721310
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Vertesy L, Burger HJ, Kenja J, Knauf M, Kogler H, Paulus EF, Ramakrishna NV, Swamy KH, Vijayakumar EK, Hammann P: Kodaistatins, novel inhibitors of glucose-6-phosphate translocase T1 from Aspergillus terreus thom DSM 11247. Isolation and structural elucidation. J Antibiot (Tokyo). 2000 Jul;53(7):677-86. doi: 10.7164/antibiotics.53.677. [PubMed:10994809 ]