NP-MRD: Showing NP-Card for (2R-trans)-2-butyl-5-heptylpyrrolidine (NP0003348)

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Record Information

Version

1.0

Created at

2020-12-09 00:38:10 UTC

Updated at

2021-07-15 16:46:11 UTC

NP-MRD ID

NP0003348

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2R-trans)-2-butyl-5-heptylpyrrolidine

Provided By

NPAtlas

Description

(2R,5R)-2-butyl-5-heptylpyrrolidine belongs to the class of organic compounds known as pyrrolidines. Pyrrolidines are compounds containing a pyrrolidine ring, which is a five-membered saturated aliphatic heterocycle with one nitrogen atom and four carbon atoms. (2R-trans)-2-butyl-5-heptylpyrrolidine is found in Streptomyces, Streptomyces longispororuber and Streptomyces longispororuber No.525. It was first documented in 2000 (PMID: 10908109). Based on a literature review very few articles have been published on (2R,5R)-2-butyl-5-heptylpyrrolidine.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242117473D          

 47 47  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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  Mrv1652306242117473D          

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  7 31  1  0  0  0  0
  8 32  1  1  0  0  0
  9 33  1  0  0  0  0
  9 34  1  0  0  0  0
 10 35  1  0  0  0  0
 10 36  1  0  0  0  0
 11 37  1  1  0  0  0
 12 38  1  0  0  0  0
 12 39  1  0  0  0  0
 13 40  1  0  0  0  0
 13 41  1  0  0  0  0
 14 42  1  0  0  0  0
 14 43  1  0  0  0  0
 15 44  1  0  0  0  0
 15 45  1  0  0  0  0
 15 46  1  0  0  0  0
 16 47  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0003348

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]N1[C@]([H])(C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H])C([H])([H])C([H])([H])[C@@]1([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C15H31N/c1-3-5-7-8-9-11-15-13-12-14(16-15)10-6-4-2/h14-16H,3-13H2,1-2H3/t14-,15-/m1/s1

> <INCHI_KEY>
FIXZYWKWWCBXRZ-HUUCEWRRSA-N

> <FORMULA>
C15H31N

> <MOLECULAR_WEIGHT>
225.42

> <EXACT_MASS>
225.245650002

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
47

> <JCHEM_AVERAGE_POLARIZABILITY>
30.671723043003926

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2R,5R)-2-butyl-5-heptylpyrrolidine

> <ALOGPS_LOGP>
5.63

> <JCHEM_LOGP>
5.203094489333333

> <ALOGPS_LOGS>
-5.72

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_BASIC>
11.74518357563708

> <JCHEM_POLAR_SURFACE_AREA>
12.03

> <JCHEM_REFRACTIVITY>
72.327

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.28e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R,5R)-2-butyl-5-heptylpyrrolidine

> <JCHEM_VEBER_RULE>
1

$$$$

     RDKit          3D

 47 47  0  0  0  0  0  0  0  0999 V2000
   -6.7669    1.4272   -0.6465 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2833    1.4588   -0.3460 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8490    0.0290   -0.0843 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3546   -0.0265    0.2290 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0430   -1.4828    0.4687 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6026   -1.6448    0.7992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7082   -1.1609   -0.3131 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7281   -1.3994    0.1324 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9423   -0.6105    1.3993 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4716   -0.4662    1.3958 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6828   -0.1241   -0.0707 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0544   -0.6005   -0.4390 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0909    0.0664    0.3964 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0275    1.5573    0.1844 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2704    1.9033   -1.2697 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6770   -0.8777   -0.7929 N   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2439    0.7212    0.0747 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8773    0.9655   -1.6494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2227    2.4375   -0.5947 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7393    1.8022   -1.2339 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0716    2.0710    0.5612 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3663   -0.4014    0.7984 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9919   -0.5423   -1.0073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0823    0.5466    1.1140 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7714    0.3449   -0.6582 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2791   -2.0370   -0.4651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6587   -1.8573    1.3173 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3258   -1.1816    1.7691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4132   -2.7460    0.9338 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8352   -0.0530   -0.4125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9289   -1.6114   -1.2778 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8219   -2.4993    0.2932 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6225   -1.2164    2.2767 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4517    0.3615    1.3376 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7339    0.3517    2.0713 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8769   -1.4472    1.6613 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4929    0.9385   -0.2374 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0776   -1.7010   -0.2425 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2376   -0.4453   -1.5220 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8918   -0.1396    1.4713 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0897   -0.3255    0.1713 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8176    2.0201    0.8268 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0607    1.9947    0.4781 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3476    2.1958   -1.7906 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6668    0.9983   -1.7715 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0183    2.7445   -1.3010 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2630   -0.3385   -1.5870 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 11 16  1  0
 16  8  1  0
  1 17  1  0
  1 18  1  0
  1 19  1  0
  2 20  1  0
  2 21  1  0
  3 22  1  0
  3 23  1  0
  4 24  1  0
  4 25  1  0
  5 26  1  0
  5 27  1  0
  6 28  1  0
  6 29  1  0
  7 30  1  0
  7 31  1  0
  8 32  1  1
  9 33  1  0
  9 34  1  0
 10 35  1  0
 10 36  1  0
 11 37  1  1
 12 38  1  0
 12 39  1  0
 13 40  1  0
 13 41  1  0
 14 42  1  0
 14 43  1  0
 15 44  1  0
 15 45  1  0
 15 46  1  0
 16 47  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -6.767   1.427  -0.647  0.00  0.00           C+0
HETATM    2  C   UNK     0      -5.283   1.459  -0.346  0.00  0.00           C+0
HETATM    3  C   UNK     0      -4.849   0.029  -0.084  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.355  -0.027   0.229  0.00  0.00           C+0
HETATM    5  C   UNK     0      -3.043  -1.483   0.469  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.603  -1.645   0.799  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.708  -1.161  -0.313  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.728  -1.399   0.132  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.942  -0.611   1.399  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.472  -0.466   1.396  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.683  -0.124  -0.071  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.054  -0.601  -0.439  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.091   0.066   0.396  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.027   1.557   0.184  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.270   1.903  -1.270  0.00  0.00           C+0
HETATM   16  N   UNK     0       1.677  -0.878  -0.793  0.00  0.00           N+0
HETATM   17  H   UNK     0      -7.244   0.721   0.075  0.00  0.00           H+0
HETATM   18  H   UNK     0      -6.877   0.966  -1.649  0.00  0.00           H+0
HETATM   19  H   UNK     0      -7.223   2.438  -0.595  0.00  0.00           H+0
HETATM   20  H   UNK     0      -4.739   1.802  -1.234  0.00  0.00           H+0
HETATM   21  H   UNK     0      -5.072   2.071   0.561  0.00  0.00           H+0
HETATM   22  H   UNK     0      -5.366  -0.401   0.798  0.00  0.00           H+0
HETATM   23  H   UNK     0      -4.992  -0.542  -1.007  0.00  0.00           H+0
HETATM   24  H   UNK     0      -3.082   0.547   1.114  0.00  0.00           H+0
HETATM   25  H   UNK     0      -2.771   0.345  -0.658  0.00  0.00           H+0
HETATM   26  H   UNK     0      -3.279  -2.037  -0.465  0.00  0.00           H+0
HETATM   27  H   UNK     0      -3.659  -1.857   1.317  0.00  0.00           H+0
HETATM   28  H   UNK     0      -1.326  -1.182   1.769  0.00  0.00           H+0
HETATM   29  H   UNK     0      -1.413  -2.746   0.934  0.00  0.00           H+0
HETATM   30  H   UNK     0      -0.835  -0.053  -0.413  0.00  0.00           H+0
HETATM   31  H   UNK     0      -0.929  -1.611  -1.278  0.00  0.00           H+0
HETATM   32  H   UNK     0       0.822  -2.499   0.293  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.623  -1.216   2.277  0.00  0.00           H+0
HETATM   34  H   UNK     0       0.452   0.362   1.338  0.00  0.00           H+0
HETATM   35  H   UNK     0       2.734   0.352   2.071  0.00  0.00           H+0
HETATM   36  H   UNK     0       2.877  -1.447   1.661  0.00  0.00           H+0
HETATM   37  H   UNK     0       2.493   0.939  -0.237  0.00  0.00           H+0
HETATM   38  H   UNK     0       4.078  -1.701  -0.243  0.00  0.00           H+0
HETATM   39  H   UNK     0       4.238  -0.445  -1.522  0.00  0.00           H+0
HETATM   40  H   UNK     0       4.892  -0.140   1.471  0.00  0.00           H+0
HETATM   41  H   UNK     0       6.090  -0.326   0.171  0.00  0.00           H+0
HETATM   42  H   UNK     0       5.818   2.020   0.827  0.00  0.00           H+0
HETATM   43  H   UNK     0       4.061   1.995   0.478  0.00  0.00           H+0
HETATM   44  H   UNK     0       4.348   2.196  -1.791  0.00  0.00           H+0
HETATM   45  H   UNK     0       5.667   0.998  -1.772  0.00  0.00           H+0
HETATM   46  H   UNK     0       6.018   2.744  -1.301  0.00  0.00           H+0
HETATM   47  H   UNK     0       1.263  -0.339  -1.587  0.00  0.00           H+0
CONECT    1    2   17   18   19                                             
CONECT    2    1    3   20   21                                             
CONECT    3    2    4   22   23                                             
CONECT    4    3    5   24   25                                             
CONECT    5    4    6   26   27                                             
CONECT    6    5    7   28   29                                             
CONECT    7    6    8   30   31                                             
CONECT    8    7    9   16   32                                             
CONECT    9    8   10   33   34                                             
CONECT   10    9   11   35   36                                             
CONECT   11   10   12   16   37                                             
CONECT   12   11   13   38   39                                             
CONECT   13   12   14   40   41                                             
CONECT   14   13   15   42   43                                             
CONECT   15   14   44   45   46                                             
CONECT   16   11    8   47                                                  
CONECT   17    1                                                            
CONECT   18    1                                                            
CONECT   19    1                                                            
CONECT   20    2                                                            
CONECT   21    2                                                            
CONECT   22    3                                                            
CONECT   23    3                                                            
CONECT   24    4                                                            
CONECT   25    4                                                            
CONECT   26    5                                                            
CONECT   27    5                                                            
CONECT   28    6                                                            
CONECT   29    6                                                            
CONECT   30    7                                                            
CONECT   31    7                                                            
CONECT   32    8                                                            
CONECT   33    9                                                            
CONECT   34    9                                                            
CONECT   35   10                                                            
CONECT   36   10                                                            
CONECT   37   11                                                            
CONECT   38   12                                                            
CONECT   39   12                                                            
CONECT   40   13                                                            
CONECT   41   13                                                            
CONECT   42   14                                                            
CONECT   43   14                                                            
CONECT   44   15                                                            
CONECT   45   15                                                            
CONECT   46   15                                                            
CONECT   47   16                                                            
MASTER        0    0    0    0    0    0    0    0   47    0   94    0
END

RDKit          3D

47 47  0  0  0  0  0  0  0  0999 V2000
   -6.7669    1.4272   -0.6465 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2833    1.4588   -0.3460 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8490    0.0290   -0.0843 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3546   -0.0265    0.2290 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0430   -1.4828    0.4687 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6026   -1.6448    0.7992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7082   -1.1609   -0.3131 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7281   -1.3994    0.1324 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9423   -0.6105    1.3993 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4716   -0.4662    1.3958 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6828   -0.1241   -0.0707 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0544   -0.6005   -0.4390 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0909    0.0664    0.3964 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0275    1.5573    0.1844 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2704    1.9033   -1.2697 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6770   -0.8777   -0.7929 N   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2439    0.7212    0.0747 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8773    0.9655   -1.6494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2227    2.4375   -0.5947 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7393    1.8022   -1.2339 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0716    2.0710    0.5612 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3663   -0.4014    0.7984 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9919   -0.5423   -1.0073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0823    0.5466    1.1140 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7714    0.3449   -0.6582 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2791   -2.0370   -0.4651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6587   -1.8573    1.3173 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3258   -1.1816    1.7691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4132   -2.7460    0.9338 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8352   -0.0530   -0.4125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9289   -1.6114   -1.2778 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8219   -2.4993    0.2932 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6225   -1.2164    2.2767 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4517    0.3615    1.3376 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7339    0.3517    2.0713 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8769   -1.4472    1.6613 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4929    0.9385   -0.2374 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0776   -1.7010   -0.2425 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2376   -0.4453   -1.5220 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8918   -0.1396    1.4713 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0897   -0.3255    0.1713 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8176    2.0201    0.8268 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0607    1.9947    0.4781 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3476    2.1958   -1.7906 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6668    0.9983   -1.7715 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0183    2.7445   -1.3010 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2630   -0.3385   -1.5870 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 11 16  1  0
 16  8  1  0
  1 17  1  0
  1 18  1  0
  1 19  1  0
  2 20  1  0
  2 21  1  0
  3 22  1  0
  3 23  1  0
  4 24  1  0
  4 25  1  0
  5 26  1  0
  5 27  1  0
  6 28  1  0
  6 29  1  0
  7 30  1  0
  7 31  1  0
  8 32  1  1
  9 33  1  0
  9 34  1  0
 10 35  1  0
 10 36  1  0
 11 37  1  1
 12 38  1  0
 12 39  1  0
 13 40  1  0
 13 41  1  0
 14 42  1  0
 14 43  1  0
 15 44  1  0
 15 45  1  0
 15 46  1  0
 16 47  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₁₅H₃₁N

Average Mass

225.4200 Da

Monoisotopic Mass

225.24565 Da

IUPAC Name

(2R,5R)-2-butyl-5-heptylpyrrolidine

Traditional Name

(2R,5R)-2-butyl-5-heptylpyrrolidine

CAS Registry Number

Not Available

SMILES

CCCCCCC[C@@H]1CC[C@@H](CCCC)N1

InChI Identifier

InChI=1S/C15H31N/c1-3-5-7-8-9-11-15-13-12-14(16-15)10-6-4-2/h14-16H,3-13H2,1-2H3/t14-,15-/m1/s1

InChI Key

FIXZYWKWWCBXRZ-HUUCEWRRSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces	NPAtlas	10908109
Streptomyces longispororuber	LOTUS Database	35616633
Streptomyces longispororuber No.525	Bacteria	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as pyrrolidines. Pyrrolidines are compounds containing a pyrrolidine ring, which is a five-membered saturated aliphatic heterocycle with one nitrogen atom and four carbon atoms.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Pyrrolidines

Sub Class

Not Available

Direct Parent

Pyrrolidines

Alternative Parents

Substituents

Pyrrolidine
Azacycle
Secondary amine
Secondary aliphatic amine
Organic nitrogen compound
Organopnictogen compound
Hydrocarbon derivative
Organonitrogen compound
Amine
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.63	ALOGPS
logP	5.2	ChemAxon
logS	-5.7	ALOGPS
pKa (Strongest Basic)	11.75	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	12.03 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	72.33 m³·mol⁻¹	ChemAxon
Polarizability	30.67 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA002430

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

137601

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Kumagai K, Shono K, Nakayama H, Ohno Y, Saji I: (2R-trans)-2-butyl-5-heptylpyrrolidine as a potent sigma receptor ligand produced by Streptomyces longispororuber. J Antibiot (Tokyo). 2000 May;53(5):467-73. doi: 10.7164/antibiotics.53.467. [PubMed:10908109 ]

Showing NP-Card for (2R-trans)-2-butyl-5-heptylpyrrolidine (NP0003348)

MOL for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

3D MOL for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

3D SDF for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

3D-SDF for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

PDB for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

3D PDB for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

SMILES for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

INCHI for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

Structure for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)

3D Structure for NP0003348 ((2R-trans)-2-butyl-5-heptylpyrrolidine)