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Record Information
Version1.0
Created at2020-12-09 00:33:08 UTC
Updated at2021-07-15 16:46:07 UTC
NP-MRD IDNP0003324
Secondary Accession NumbersNone
Natural Product Identification
Common NameSB-203207
Provided ByNPAtlasNPAtlas Logo
Description(4AR,6S,7R,7aS)-7-{[2-({[(2S,3S)-2-amino-1-hydroxy-3-methylpentylidene]amino}sulfonyl)-1-hydroxyethylidene]amino}-6-hydroxy-4-(C-hydroxycarbonimidoyl)-2-methyl-1H,2H,4aH,5H,6H,7H,7aH-cyclopenta[c]pyridine-7-carboxylic acid belongs to the class of organic compounds known as isoleucine and derivatives. Isoleucine and derivatives are compounds containing isoleucine or a derivative thereof resulting from reaction of isoleucine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom. SB-203207 is found in Streptomyces and Streptomyces sp. NCIMB 40513. It was first documented in 2000 (PMID: 10866218). Based on a literature review very few articles have been published on (4aR,6S,7R,7aS)-7-{[2-({[(2S,3S)-2-amino-1-hydroxy-3-methylpentylidene]amino}sulfonyl)-1-hydroxyethylidene]amino}-6-hydroxy-4-(C-hydroxycarbonimidoyl)-2-methyl-1H,2H,4aH,5H,6H,7H,7aH-cyclopenta[c]pyridine-7-carboxylic acid.
Structure
Data?1624573785
Synonyms
ValueSource
(4AR,6S,7R,7as)-7-{[2-({[(2S,3S)-2-amino-1-hydroxy-3-methylpentylidene]amino}sulfonyl)-1-hydroxyethylidene]amino}-6-hydroxy-4-(C-hydroxycarbonimidoyl)-2-methyl-1H,2H,4ah,5H,6H,7H,7ah-cyclopenta[c]pyridine-7-carboxylateGenerator
(4AR,6S,7R,7as)-7-{[2-({[(2S,3S)-2-amino-1-hydroxy-3-methylpentylidene]amino}sulphonyl)-1-hydroxyethylidene]amino}-6-hydroxy-4-(C-hydroxycarbonimidoyl)-2-methyl-1H,2H,4ah,5H,6H,7H,7ah-cyclopenta[c]pyridine-7-carboxylateGenerator
(4AR,6S,7R,7as)-7-{[2-({[(2S,3S)-2-amino-1-hydroxy-3-methylpentylidene]amino}sulphonyl)-1-hydroxyethylidene]amino}-6-hydroxy-4-(C-hydroxycarbonimidoyl)-2-methyl-1H,2H,4ah,5H,6H,7H,7ah-cyclopenta[c]pyridine-7-carboxylic acidGenerator
Chemical FormulaC19H31N5O8S
Average Mass489.5400 Da
Monoisotopic Mass489.18933 Da
IUPAC Name(4aR,6S,7R,7aS)-7-(2-{[(2S,3S)-2-amino-3-methylpentanamido]sulfonyl}acetamido)-4-carbamoyl-6-hydroxy-2-methyl-1H,2H,4aH,5H,6H,7H,7aH-cyclopenta[c]pyridine-7-carboxylic acid
Traditional Name(4aR,6S,7R,7aS)-7-{2-[(2S,3S)-2-amino-3-methylpentanamidosulfonyl]acetamido}-4-carbamoyl-6-hydroxy-2-methyl-1H,4aH,5H,6H,7aH-cyclopenta[c]pyridine-7-carboxylic acid
CAS Registry NumberNot Available
SMILES
CC[C@H](C)[C@H](N)C(=O)NS(=O)(=O)CC(=O)N[C@]1([C@@H](O)C[C@@H]2[C@H]1CN(C)C=C2C(N)=O)C(O)=O
InChI Identifier
InChI=1S/C19H31N5O8S/c1-4-9(2)15(20)17(28)23-33(31,32)8-14(26)22-19(18(29)30)12-7-24(3)6-11(16(21)27)10(12)5-13(19)25/h6,9-10,12-13,15,25H,4-5,7-8,20H2,1-3H3,(H2,21,27)(H,22,26)(H,23,28)(H,29,30)/t9-,10-,12+,13-,15-,19+/m0/s1
InChI KeyHDXFGBFIEQUETL-IVWWPFAYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
StreptomycesNPAtlas
Streptomyces sp. NCIMB 40513Bacteria
Chemical Taxonomy
Description Belongs to the class of organic compounds known as isoleucine and derivatives. Isoleucine and derivatives are compounds containing isoleucine or a derivative thereof resulting from reaction of isoleucine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentIsoleucine and derivatives
Alternative Parents
Substituents
  • Isoleucine or derivatives
  • N-acyl-l-alpha-amino acid
  • N-acyl-alpha amino acid or derivatives
  • N-acyl-alpha-amino acid
  • Tetrahydropyridine
  • Beta-hydroxy acid
  • Hydroxy acid
  • Organic sulfonic acid or derivatives
  • Vinylogous amide
  • Aminosulfonyl compound
  • Sulfonyl
  • Organosulfonic acid or derivatives
  • Cyclic alcohol
  • Amino acid
  • Carboxamide group
  • Primary carboxylic acid amide
  • Secondary alcohol
  • Tertiary aliphatic amine
  • Secondary carboxylic acid amide
  • Tertiary amine
  • Carboxylic acid
  • Enamine
  • Monocarboxylic acid or derivatives
  • Allylamine
  • Azacycle
  • Organoheterocyclic compound
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Amine
  • Primary aliphatic amine
  • Organic oxide
  • Organopnictogen compound
  • Alcohol
  • Organonitrogen compound
  • Organooxygen compound
  • Organosulfur compound
  • Primary amine
  • Carbonyl group
  • Organic oxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-2.3ALOGPS
logP-4.9ChemAxon
logS-2.5ALOGPS
pKa (Strongest Acidic)2.81ChemAxon
pKa (Strongest Basic)6.95ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area222.22 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity114.92 m³·mol⁻¹ChemAxon
Polarizability48.17 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA017073
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8132786
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Houge-Frydrych CS, Gilpin ML, Skett PW, Tyler JW: SB-203207 and SB-203208, two novel isoleucyl tRNA synthetase inhibitors from a Streptomyces sp. II. Structure determination. J Antibiot (Tokyo). 2000 Apr;53(4):364-72. doi: 10.7164/antibiotics.53.364. [PubMed:10866218 ]