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Record Information
Version1.0
Created at2020-12-09 00:32:36 UTC
Updated at2021-07-15 16:46:00 UTC
NP-MRD IDNP0003276
Secondary Accession NumbersNone
Natural Product Identification
Common NameRoseoferin G
Provided ByNPAtlasNPAtlas Logo
Description6-Hydroxy-2-({hydroxy[1-(2-methyldecanoyl)pyrrolidin-2-yl]methylidene}amino)-N-{1-[(1-{[1-({1-[(1-{[1-({1-[(2-hydroxyethyl)(methyl)amino]propan-2-yl}-C-hydroxycarbonimidoyl)-1-methylethyl]-C-hydroxycarbonimidoyl}-1-methylethyl)-C-hydroxycarbonimidoyl]-2-methylbutyl}-C-hydroxycarbonimidoyl)-2-methylbutyl]-C-hydroxycarbonimidoyl}-2-methylpropyl)-C-hydroxycarbonimidoyl]ethyl}-4-methyl-8-oxodecanimidic acid belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Roseoferin G is found in Mycogone rosea. It was first documented in 2000 (PMID: 10805580). Based on a literature review very few articles have been published on 6-hydroxy-2-({hydroxy[1-(2-methyldecanoyl)pyrrolidin-2-yl]methylidene}amino)-N-{1-[(1-{[1-({1-[(1-{[1-({1-[(2-hydroxyethyl)(methyl)amino]propan-2-yl}-C-hydroxycarbonimidoyl)-1-methylethyl]-C-hydroxycarbonimidoyl}-1-methylethyl)-C-hydroxycarbonimidoyl]-2-methylbutyl}-C-hydroxycarbonimidoyl)-2-methylbutyl]-C-hydroxycarbonimidoyl}-2-methylpropyl)-C-hydroxycarbonimidoyl]ethyl}-4-methyl-8-oxodecanimidic acid.
Structure
Thumb
Synonyms
ValueSource
6-Hydroxy-2-({hydroxy[1-(2-methyldecanoyl)pyrrolidin-2-yl]methylidene}amino)-N-{1-[(1-{[1-({1-[(1-{[1-({1-[(2-hydroxyethyl)(methyl)amino]propan-2-yl}-C-hydroxycarbonimidoyl)-1-methylethyl]-C-hydroxycarbonimidoyl}-1-methylethyl)-C-hydroxycarbonimidoyl]-2-methylbutyl}-C-hydroxycarbonimidoyl)-2-methylbutyl]-C-hydroxycarbonimidoyl}-2-methylpropyl)-C-hydroxycarbonimidoyl]ethyl}-4-methyl-8-oxodecanimidateGenerator
Chemical FormulaNot Available
Average MassNot Available
Monoisotopic MassNot Available
IUPAC Name(2S,4S,6S)-6-hydroxy-N-[(1R)-1-{[(1S)-1-{[(1R,2R)-1-{[(1S,2S)-1-({1-[(1-{[(2R)-1-[(2-hydroxyethyl)(methyl)amino]propan-2-yl]carbamoyl}-1-methylethyl)carbamoyl]-1-methylethyl}carbamoyl)-2-methylbutyl]carbamoyl}-2-methylbutyl]carbamoyl}-2-methylpropyl]carbamoyl}ethyl]-4-methyl-2-{[(2R)-1-[(2R)-2-methyldecanoyl]pyrrolidin-2-yl]formamido}-8-oxodecanamide
Traditional Name(2S,4S,6S)-6-hydroxy-N-[(1R)-1-{[(1S)-1-{[(1R,2R)-1-{[(1S,2S)-1-({1-[(1-{[(2R)-1-[(2-hydroxyethyl)(methyl)amino]propan-2-yl]carbamoyl}-1-methylethyl)carbamoyl]-1-methylethyl}carbamoyl)-2-methylbutyl]carbamoyl}-2-methylbutyl]carbamoyl}-2-methylpropyl]carbamoyl}ethyl]-4-methyl-2-{[(2R)-1-[(2R)-2-methyldecanoyl]pyrrolidin-2-yl]formamido}-8-oxodecanamide
CAS Registry NumberNot Available
SMILES
CCCCCCCCC(C)C(=O)N1CCCC1C(=O)NC(CC(C)CC(O)CC(=O)CC)C(=O)NC(C)C(=O)NC(C(C)C)C(=O)NC(C(C)CC)C(=O)NC(C(C)CC)C(=O)NC(C)(C)C(=O)NC(C)(C)C(=O)NC(C)CN(C)CCO
InChI Identifier
InChI=1S/C61H112N10O12/c1-18-22-23-24-25-26-28-41(10)57(81)71-30-27-29-47(71)53(77)64-46(34-38(7)33-45(74)35-44(73)21-4)52(76)63-43(12)51(75)65-48(37(5)6)54(78)66-49(39(8)19-2)55(79)67-50(40(9)20-3)56(80)68-61(15,16)59(83)69-60(13,14)58(82)62-42(11)36-70(17)31-32-72/h37-43,45-50,72,74H,18-36H2,1-17H3,(H,62,82)(H,63,76)(H,64,77)(H,65,75)(H,66,78)(H,67,79)(H,68,80)(H,69,83)
InChI KeyXLIXDHZWFVRVQH-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Mycogone roseaNPAtlas
Chemical Taxonomy
Description Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentOligopeptides
Alternative Parents
Substituents
  • Alpha-oligopeptide
  • Isoleucine or derivatives
  • N-acyl-alpha amino acid or derivatives
  • Valine or derivatives
  • Proline or derivatives
  • Alpha-amino acid amide
  • Alanine or derivatives
  • N-substituted-alpha-amino acid
  • Alpha-amino acid or derivatives
  • N-acylpyrrolidine
  • Pyrrolidine carboxylic acid or derivatives
  • Pyrrolidine-2-carboxamide
  • N-acyl-amine
  • Fatty amide
  • Fatty acyl
  • Beta-hydroxy ketone
  • Tertiary carboxylic acid amide
  • Pyrrolidine
  • Carboxamide group
  • Tertiary aliphatic amine
  • Tertiary amine
  • Secondary carboxylic acid amide
  • Secondary alcohol
  • 1,2-aminoalcohol
  • Ketone
  • Amino acid or derivatives
  • Alkanolamine
  • Azacycle
  • Organoheterocyclic compound
  • Carbonyl group
  • Alcohol
  • Hydrocarbon derivative
  • Amine
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Primary alcohol
  • Organooxygen compound
  • Organonitrogen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.31ALOGPS
logP4.76ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)11.63ChemAxon
pKa (Strongest Basic)8.45ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count13ChemAxon
Hydrogen Donor Count10ChemAxon
Polar Surface Area313.88 ŲChemAxon
Rotatable Bond Count40ChemAxon
Refractivity320.02 m³·mol⁻¹ChemAxon
Polarizability136.88 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA000711
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78444750
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound85287370
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Degenkolb T, Heinze S, Schlegel B, Dornberger K, Mollmann U, Dahse HM, Grafe U: Roseoferin, a new aminolipopeptide antibiotic complex from Mycogone rosea DSM 12973, structures and biological activities. J Antibiot (Tokyo). 2000 Feb;53(2):184-90. doi: 10.7164/antibiotics.53.184. [PubMed:10805580 ]