NP-MRD: Showing NP-Card for Lysidiside P (NP0001733)

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Record Information

Version

1.0

Created at

2020-10-02 22:51:49 UTC

Updated at

2020-11-24 22:27:31 UTC

NP-MRD ID

NP0001733

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Lysidiside P

Description

(2S,3R,4R,5R,6R)-2-methyl-6-{[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-{3-hydroxy-5-[(Z)-2-(4-hydroxyphenyl)ethenyl]phenoxy}oxan-2-yl]methoxy}oxane-3,4,5-triol belongs to the class of organic compounds known as stilbene glycosides. Stilbene glycosides are compounds structurally characterized by the presence of a carbohydrate moiety glycosidically linked to the stilbene skeleton. Lysidiside P is found in Lysidice brevicalyx. Based on a literature review very few articles have been published on (2S,3R,4R,5R,6R)-2-methyl-6-{[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-{3-hydroxy-5-[(Z)-2-(4-hydroxyphenyl)ethenyl]phenoxy}oxan-2-yl]methoxy}oxane-3,4,5-triol.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1652310032000512D          

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M  END

NP0001733
     RDKit          3D

 70 73  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1652310032000512D          

 70 73  0  0  1  0            999 V2000
    0.7145   -6.1875    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -6.6000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.0000   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.4289   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.1434   -7.8375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    3.5724  -10.3125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724  -11.1375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8579  -10.7250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868  -11.5500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868  -12.3750    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2868  -13.2000    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013  -12.7875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1446  -13.6000    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.7158  -12.3750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302  -12.7875    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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    7.1447  -14.8500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    6.4302  -13.6125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.1447  -13.2000    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158  -14.0250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2625  -14.7143    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724  -12.7875    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579  -13.2000    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724  -13.6125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724  -14.4375    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579  -12.3750    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434  -11.9625    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434  -12.7875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289  -13.2000    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579  -11.5500    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5724  -11.9625    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434  -11.1375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3184  -11.1375    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289  -10.7250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -9.0750    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -7.4250    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  2  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 16 19  2  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 23 22  1  6  0  0  0
 23 24  1  1  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  1  0  0  0
 26 28  1  6  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
 28 31  1  0  0  0  0
 32 31  1  6  0  0  0
 32 33  1  1  0  0  0
 32 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  6  0  0  0
 35 37  1  1  0  0  0
 37 38  1  0  0  0  0
 37 39  1  0  0  0  0
 37 40  1  0  0  0  0
 35 41  1  0  0  0  0
 41 42  1  1  0  0  0
 41 43  1  6  0  0  0
 43 44  1  0  0  0  0
 41 45  1  0  0  0  0
 45 46  1  6  0  0  0
 45 47  1  1  0  0  0
 47 48  1  0  0  0  0
 45 49  1  0  0  0  0
 32 49  1  0  0  0  0
 49 50  1  6  0  0  0
 49 51  1  6  0  0  0
 51 52  1  0  0  0  0
 26 53  1  0  0  0  0
 53 54  1  6  0  0  0
 53 55  1  1  0  0  0
 55 56  1  0  0  0  0
 53 57  1  0  0  0  0
 57 58  1  1  0  0  0
 57 59  1  6  0  0  0
 59 60  1  0  0  0  0
 57 61  1  0  0  0  0
 23 61  1  0  0  0  0
 61 62  1  6  0  0  0
 61 63  1  6  0  0  0
 63 64  1  0  0  0  0
 21 65  2  0  0  0  0
 13 65  1  0  0  0  0
 65 66  1  0  0  0  0
  8 67  1  0  0  0  0
 67 68  1  0  0  0  0
 67 69  2  0  0  0  0
  3 69  1  0  0  0  0
 69 70  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0001733

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C([H])C([H])=C(\C([H])=C(\[H])C2=C([H])C(O[H])=C([H])C(O[C@]3([H])O[C@]([H])(C([H])([H])O[C@]4([H])O[C@@]([H])(C([H])([H])[H])[C@]([H])(O[H])[C@@]([H])(O[H])[C@@]4([H])O[H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]3([H])O[H])=C2[H])C([H])=C1[H]

> <INCHI_IDENTIFIER>
InChI=1S/C26H32O12/c1-12-19(29)21(31)23(33)25(36-12)35-11-18-20(30)22(32)24(34)26(38-18)37-17-9-14(8-16(28)10-17)3-2-13-4-6-15(27)7-5-13/h2-10,12,18-34H,11H2,1H3/b3-2-/t12-,18+,19-,20+,21+,22-,23+,24+,25+,26+/m0/s1

> <INCHI_KEY>
BBTZSNZPLSTSDA-CJOUEVQTSA-N

> <FORMULA>
C26H32O12

> <MOLECULAR_WEIGHT>
536.53

> <EXACT_MASS>
536.18937647

> <JCHEM_ACCEPTOR_COUNT>
12

> <JCHEM_ATOM_COUNT>
70

> <JCHEM_AVERAGE_POLARIZABILITY>
53.45533554443381

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
8

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S,3R,4S,5S,6R)-2-{3-hydroxy-5-[(Z)-2-(4-hydroxyphenyl)ethenyl]phenoxy}-6-({[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}methyl)oxane-3,4,5-triol

> <ALOGPS_LOGP>
0.11

> <JCHEM_LOGP>
0.41039711400000095

> <ALOGPS_LOGS>
-2.61

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
9.719092173516618

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.101652236363599

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6121823516836606

> <JCHEM_POLAR_SURFACE_AREA>
198.76

> <JCHEM_REFRACTIVITY>
130.46950000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.31e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S,3R,4S,5S,6R)-2-{3-hydroxy-5-[(Z)-2-(4-hydroxyphenyl)ethenyl]phenoxy}-6-({[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}methyl)oxane-3,4,5-triol

> <JCHEM_VEBER_RULE>
0

$$$$

NP0001733
     RDKit          3D

 70 73  0  0  0  0  0  0  0  0999 V2000
   -7.4290    1.9578    0.9933 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8126    0.5941    0.7969 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.8548    0.6784   -0.2120 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0893   -0.4950   -0.2784 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9007   -0.3834    0.4020 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8298   -0.4922   -0.4807 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4980   -0.3680    0.2775 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4658   -0.4777   -0.6222 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3638    0.6172   -0.6828 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3974    0.4958   -1.5991 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7494    0.5197   -1.4110 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5786    0.3722   -2.5301 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9452    0.3905   -2.3914 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7782    0.2478   -3.4754 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5012    0.5582   -1.1183 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7458    0.7044    0.0108 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2458    0.7837    1.3640 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2604    0.2436    1.9189 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1947   -0.6495    1.3104 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9981   -1.5503    0.3146 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0279   -2.2991   -0.2620 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3153   -2.1470    0.1740 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3748   -2.8797   -0.3792 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5473   -1.2431    1.1843 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5254   -0.5148    1.7392 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3577    0.6780   -0.2017 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5186    1.8208   -0.9528 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3093    2.9589   -1.0746 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4768    2.0850    0.1691 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7275    2.3940   -0.3757 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5744    0.8971    1.0599 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6094    0.9833    2.0887 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8806   -1.6837    0.1934 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.3554   -2.8245   -0.3718 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3407   -1.5916   -0.1854 C   0  0  2  0  0  0  0  0  0  0  0  0
   -7.4325   -1.5336   -1.5735 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9434   -0.3493    0.3880 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.7455   -0.5710    1.4926 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8877    2.5700    1.7391 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4706    1.8098    1.3487 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4799    2.4376   -0.0035 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3201    0.2421    1.7313 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8907   -0.6466   -1.3757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8725   -1.5032   -0.9565 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9339    0.2527   -1.2759 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5259   -1.2331    0.9929 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8175    0.7487    0.3173 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1448    0.2413   -3.5225 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4573    0.1231   -4.4207 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5830    0.6184   -1.0832 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6297    1.4393    2.0521 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4287    0.5041    3.0137 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0150   -1.7622   -0.0399 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8092   -2.9999   -1.0534 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2192   -3.5393   -1.1137 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.5675   -1.1301    1.5218 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7618    0.1771    2.5259 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7710    0.7979    0.7036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1066    1.6669   -1.8799 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4103    3.3636   -0.1663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1305    2.9905    0.7585 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0496    3.2788   -0.0926 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5550    0.9383    1.6418 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8698    0.3651    2.8271 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7873   -1.7254    1.2949 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9173   -3.6112   -0.1690 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8472   -2.4877    0.2213 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5625   -1.7325   -1.9867 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5150    0.2129   -0.3994 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6242   -0.8975    1.1496 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22 23  1  0
 22 24  1  0
 24 25  2  0
 16 26  2  0
  9 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
 29 31  1  0
 31 32  1  0
  4 33  1  0
 33 34  1  0
 33 35  1  0
 35 36  1  0
 35 37  1  0
 37 38  1  0
 37  2  1  0
 31  7  1  0
 26 11  1  0
 25 19  1  0
  1 39  1  0
  1 40  1  0
  1 41  1  0
  2 42  1  1
  4 43  1  6
  6 44  1  0
  6 45  1  0
  7 46  1  1
  9 47  1  1
 12 48  1  0
 14 49  1  0
 15 50  1  0
 17 51  1  0
 18 52  1  0
 20 53  1  0
 21 54  1  0
 23 55  1  0
 24 56  1  0
 25 57  1  0
 26 58  1  0
 27 59  1  6
 28 60  1  0
 29 61  1  1
 30 62  1  0
 31 63  1  1
 32 64  1  0
 33 65  1  1
 34 66  1  0
 35 67  1  1
 36 68  1  0
 37 69  1  6
 38 70  1  0
M  END

HEADER    PROTEIN                                 03-OCT-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-OCT-20         0                                  
HETATM    1  H   UNK     0       1.334 -11.550   0.000  0.00  0.00           H+0
HETATM    2  O   UNK     0       0.000 -12.320   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       0.000 -13.860   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.334 -14.630   0.000  0.00  0.00           C+0
HETATM    5  H   UNK     0       2.667 -13.860   0.000  0.00  0.00           H+0
HETATM    6  C   UNK     0       1.334 -16.170   0.000  0.00  0.00           C+0
HETATM    7  H   UNK     0       1.334 -17.710   0.000  0.00  0.00           H+0
HETATM    8  C   UNK     0       0.000 -16.940   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.000 -18.480   0.000  0.00  0.00           C+0
HETATM   10  H   UNK     0      -1.334 -19.250   0.000  0.00  0.00           H+0
HETATM   11  C   UNK     0       1.334 -19.250   0.000  0.00  0.00           C+0
HETATM   12  H   UNK     0       1.334 -20.790   0.000  0.00  0.00           H+0
HETATM   13  C   UNK     0       2.667 -18.480   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.667 -16.940   0.000  0.00  0.00           C+0
HETATM   15  H   UNK     0       2.667 -15.400   0.000  0.00  0.00           H+0
HETATM   16  C   UNK     0       4.001 -16.170   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       4.001 -14.630   0.000  0.00  0.00           O+0
HETATM   18  H   UNK     0       5.335 -13.860   0.000  0.00  0.00           H+0
HETATM   19  C   UNK     0       5.335 -16.940   0.000  0.00  0.00           C+0
HETATM   20  H   UNK     0       6.668 -16.170   0.000  0.00  0.00           H+0
HETATM   21  C   UNK     0       5.335 -18.480   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       6.668 -19.250   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       6.668 -20.790   0.000  0.00  0.00           C+0
HETATM   24  H   UNK     0       5.335 -20.020   0.000  0.00  0.00           H+0
HETATM   25  O   UNK     0       8.002 -21.560   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       8.002 -23.100   0.000  0.00  0.00           C+0
HETATM   27  H   UNK     0       8.002 -24.640   0.000  0.00  0.00           H+0
HETATM   28  C   UNK     0       9.336 -23.870   0.000  0.00  0.00           C+0
HETATM   29  H   UNK     0       9.603 -25.387   0.000  0.00  0.00           H+0
HETATM   30  H   UNK     0      10.515 -24.860   0.000  0.00  0.00           H+0
HETATM   31  O   UNK     0      10.669 -23.100   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      12.003 -23.870   0.000  0.00  0.00           C+0
HETATM   33  H   UNK     0      12.003 -22.330   0.000  0.00  0.00           H+0
HETATM   34  O   UNK     0      13.337 -23.100   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      14.670 -23.870   0.000  0.00  0.00           C+0
HETATM   36  H   UNK     0      16.004 -24.640   0.000  0.00  0.00           H+0
HETATM   37  C   UNK     0      16.004 -23.100   0.000  0.00  0.00           C+0
HETATM   38  H   UNK     0      17.492 -23.499   0.000  0.00  0.00           H+0
HETATM   39  H   UNK     0      16.774 -21.766   0.000  0.00  0.00           H+0
HETATM   40  H   UNK     0      14.915 -22.011   0.000  0.00  0.00           H+0
HETATM   41  C   UNK     0      14.670 -25.410   0.000  0.00  0.00           C+0
HETATM   42  H   UNK     0      14.670 -26.950   0.000  0.00  0.00           H+0
HETATM   43  O   UNK     0      16.004 -26.180   0.000  0.00  0.00           O+0
HETATM   44  H   UNK     0      17.338 -26.950   0.000  0.00  0.00           H+0
HETATM   45  C   UNK     0      13.337 -26.180   0.000  0.00  0.00           C+0
HETATM   46  H   UNK     0      12.003 -26.950   0.000  0.00  0.00           H+0
HETATM   47  O   UNK     0      13.337 -27.720   0.000  0.00  0.00           O+0
HETATM   48  H   UNK     0      13.337 -29.260   0.000  0.00  0.00           H+0
HETATM   49  C   UNK     0      12.003 -25.410   0.000  0.00  0.00           C+0
HETATM   50  H   UNK     0      13.337 -24.640   0.000  0.00  0.00           H+0
HETATM   51  O   UNK     0      10.669 -26.180   0.000  0.00  0.00           O+0
HETATM   52  H   UNK     0       9.823 -27.467   0.000  0.00  0.00           H+0
HETATM   53  C   UNK     0       6.668 -23.870   0.000  0.00  0.00           C+0
HETATM   54  H   UNK     0       5.335 -24.640   0.000  0.00  0.00           H+0
HETATM   55  O   UNK     0       6.668 -25.410   0.000  0.00  0.00           O+0
HETATM   56  H   UNK     0       6.668 -26.950   0.000  0.00  0.00           H+0
HETATM   57  C   UNK     0       5.335 -23.100   0.000  0.00  0.00           C+0
HETATM   58  H   UNK     0       4.001 -22.330   0.000  0.00  0.00           H+0
HETATM   59  O   UNK     0       4.001 -23.870   0.000  0.00  0.00           O+0
HETATM   60  H   UNK     0       2.667 -24.640   0.000  0.00  0.00           H+0
HETATM   61  C   UNK     0       5.335 -21.560   0.000  0.00  0.00           C+0
HETATM   62  H   UNK     0       6.668 -22.330   0.000  0.00  0.00           H+0
HETATM   63  O   UNK     0       4.001 -20.790   0.000  0.00  0.00           O+0
HETATM   64  H   UNK     0       2.461 -20.790   0.000  0.00  0.00           H+0
HETATM   65  C   UNK     0       4.001 -19.250   0.000  0.00  0.00           C+0
HETATM   66  H   UNK     0       2.667 -20.020   0.000  0.00  0.00           H+0
HETATM   67  C   UNK     0      -1.334 -16.170   0.000  0.00  0.00           C+0
HETATM   68  H   UNK     0      -2.667 -16.940   0.000  0.00  0.00           H+0
HETATM   69  C   UNK     0      -1.334 -14.630   0.000  0.00  0.00           C+0
HETATM   70  H   UNK     0      -2.667 -13.860   0.000  0.00  0.00           H+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   69                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   67                                                  
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   65                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17   19                                                  
CONECT   17   16   18                                                       
CONECT   18   17                                                            
CONECT   19   16   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22   65                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24   25   61                                             
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25   27   28   53                                             
CONECT   27   26                                                            
CONECT   28   26   29   30   31                                             
CONECT   29   28                                                            
CONECT   30   28                                                            
CONECT   31   28   32                                                       
CONECT   32   31   33   34   49                                             
CONECT   33   32                                                            
CONECT   34   32   35                                                       
CONECT   35   34   36   37   41                                             
CONECT   36   35                                                            
CONECT   37   35   38   39   40                                             
CONECT   38   37                                                            
CONECT   39   37                                                            
CONECT   40   37                                                            
CONECT   41   35   42   43   45                                             
CONECT   42   41                                                            
CONECT   43   41   44                                                       
CONECT   44   43                                                            
CONECT   45   41   46   47   49                                             
CONECT   46   45                                                            
CONECT   47   45   48                                                       
CONECT   48   47                                                            
CONECT   49   45   32   50   51                                             
CONECT   50   49                                                            
CONECT   51   49   52                                                       
CONECT   52   51                                                            
CONECT   53   26   54   55   57                                             
CONECT   54   53                                                            
CONECT   55   53   56                                                       
CONECT   56   55                                                            
CONECT   57   53   58   59   61                                             
CONECT   58   57                                                            
CONECT   59   57   60                                                       
CONECT   60   59                                                            
CONECT   61   57   23   62   63                                             
CONECT   62   61                                                            
CONECT   63   61   64                                                       
CONECT   64   63                                                            
CONECT   65   21   13   66                                                  
CONECT   66   65                                                            
CONECT   67    8   68   69                                                  
CONECT   68   67                                                            
CONECT   69   67    3   70                                                  
CONECT   70   69                                                            
MASTER        0    0    0    0    0    0    0    0   70    0  146    0
END

COMPND    NP0001733
HETATM    1  C1  UNL     1      -7.429   1.958   0.993  1.00  0.00           C  
HETATM    2  C2  UNL     1      -6.813   0.594   0.797  1.00  0.00           C  
HETATM    3  O1  UNL     1      -5.855   0.678  -0.212  1.00  0.00           O  
HETATM    4  C3  UNL     1      -5.089  -0.495  -0.278  1.00  0.00           C  
HETATM    5  O2  UNL     1      -3.901  -0.383   0.402  1.00  0.00           O  
HETATM    6  C4  UNL     1      -2.830  -0.492  -0.481  1.00  0.00           C  
HETATM    7  C5  UNL     1      -1.498  -0.368   0.278  1.00  0.00           C  
HETATM    8  O3  UNL     1      -0.466  -0.478  -0.622  1.00  0.00           O  
HETATM    9  C6  UNL     1       0.364   0.617  -0.683  1.00  0.00           C  
HETATM   10  O4  UNL     1       1.397   0.496  -1.599  1.00  0.00           O  
HETATM   11  C7  UNL     1       2.749   0.520  -1.411  1.00  0.00           C  
HETATM   12  C8  UNL     1       3.579   0.372  -2.530  1.00  0.00           C  
HETATM   13  C9  UNL     1       4.945   0.390  -2.391  1.00  0.00           C  
HETATM   14  O5  UNL     1       5.778   0.248  -3.475  1.00  0.00           O  
HETATM   15  C10 UNL     1       5.501   0.558  -1.118  1.00  0.00           C  
HETATM   16  C11 UNL     1       4.746   0.704   0.011  1.00  0.00           C  
HETATM   17  C12 UNL     1       5.246   0.784   1.364  1.00  0.00           C  
HETATM   18  C13 UNL     1       6.260   0.244   1.919  1.00  0.00           C  
HETATM   19  C14 UNL     1       7.195  -0.650   1.310  1.00  0.00           C  
HETATM   20  C15 UNL     1       6.998  -1.550   0.315  1.00  0.00           C  
HETATM   21  C16 UNL     1       8.028  -2.299  -0.262  1.00  0.00           C  
HETATM   22  C17 UNL     1       9.315  -2.147   0.174  1.00  0.00           C  
HETATM   23  O6  UNL     1      10.375  -2.880  -0.379  1.00  0.00           O  
HETATM   24  C18 UNL     1       9.547  -1.243   1.184  1.00  0.00           C  
HETATM   25  C19 UNL     1       8.525  -0.515   1.739  1.00  0.00           C  
HETATM   26  C20 UNL     1       3.358   0.678  -0.202  1.00  0.00           C  
HETATM   27  C21 UNL     1      -0.519   1.821  -0.953  1.00  0.00           C  
HETATM   28  O7  UNL     1       0.309   2.959  -1.075  1.00  0.00           O  
HETATM   29  C22 UNL     1      -1.477   2.085   0.169  1.00  0.00           C  
HETATM   30  O8  UNL     1      -2.727   2.394  -0.376  1.00  0.00           O  
HETATM   31  C23 UNL     1      -1.574   0.897   1.060  1.00  0.00           C  
HETATM   32  O9  UNL     1      -0.609   0.983   2.089  1.00  0.00           O  
HETATM   33  C24 UNL     1      -5.881  -1.684   0.193  1.00  0.00           C  
HETATM   34  O10 UNL     1      -5.355  -2.824  -0.372  1.00  0.00           O  
HETATM   35  C25 UNL     1      -7.341  -1.592  -0.185  1.00  0.00           C  
HETATM   36  O11 UNL     1      -7.432  -1.534  -1.574  1.00  0.00           O  
HETATM   37  C26 UNL     1      -7.943  -0.349   0.388  1.00  0.00           C  
HETATM   38  O12 UNL     1      -8.745  -0.571   1.493  1.00  0.00           O  
HETATM   39  H1  UNL     1      -6.888   2.570   1.739  1.00  0.00           H  
HETATM   40  H2  UNL     1      -8.471   1.810   1.349  1.00  0.00           H  
HETATM   41  H3  UNL     1      -7.480   2.438  -0.003  1.00  0.00           H  
HETATM   42  H4  UNL     1      -6.320   0.242   1.731  1.00  0.00           H  
HETATM   43  H5  UNL     1      -4.891  -0.647  -1.376  1.00  0.00           H  
HETATM   44  H6  UNL     1      -2.872  -1.503  -0.956  1.00  0.00           H  
HETATM   45  H7  UNL     1      -2.934   0.253  -1.276  1.00  0.00           H  
HETATM   46  H8  UNL     1      -1.526  -1.233   0.993  1.00  0.00           H  
HETATM   47  H9  UNL     1       0.818   0.749   0.317  1.00  0.00           H  
HETATM   48  H10 UNL     1       3.145   0.241  -3.522  1.00  0.00           H  
HETATM   49  H11 UNL     1       5.457   0.123  -4.421  1.00  0.00           H  
HETATM   50  H12 UNL     1       6.583   0.618  -1.083  1.00  0.00           H  
HETATM   51  H13 UNL     1       4.630   1.439   2.052  1.00  0.00           H  
HETATM   52  H14 UNL     1       6.429   0.504   3.014  1.00  0.00           H  
HETATM   53  H15 UNL     1       6.015  -1.762  -0.040  1.00  0.00           H  
HETATM   54  H16 UNL     1       7.809  -3.000  -1.053  1.00  0.00           H  
HETATM   55  H17 UNL     1      10.219  -3.539  -1.114  1.00  0.00           H  
HETATM   56  H18 UNL     1      10.567  -1.130   1.522  1.00  0.00           H  
HETATM   57  H19 UNL     1       8.762   0.177   2.526  1.00  0.00           H  
HETATM   58  H20 UNL     1       2.771   0.798   0.704  1.00  0.00           H  
HETATM   59  H21 UNL     1      -1.107   1.667  -1.880  1.00  0.00           H  
HETATM   60  H22 UNL     1       0.410   3.364  -0.166  1.00  0.00           H  
HETATM   61  H23 UNL     1      -1.130   2.990   0.759  1.00  0.00           H  
HETATM   62  H24 UNL     1      -3.050   3.279  -0.093  1.00  0.00           H  
HETATM   63  H25 UNL     1      -2.555   0.938   1.642  1.00  0.00           H  
HETATM   64  H26 UNL     1      -0.870   0.365   2.827  1.00  0.00           H  
HETATM   65  H27 UNL     1      -5.787  -1.725   1.295  1.00  0.00           H  
HETATM   66  H28 UNL     1      -5.917  -3.611  -0.169  1.00  0.00           H  
HETATM   67  H29 UNL     1      -7.847  -2.488   0.221  1.00  0.00           H  
HETATM   68  H30 UNL     1      -6.562  -1.733  -1.987  1.00  0.00           H  
HETATM   69  H31 UNL     1      -8.515   0.213  -0.399  1.00  0.00           H  
HETATM   70  H32 UNL     1      -9.624  -0.898   1.150  1.00  0.00           H  
CONECT    1    2   39   40   41
CONECT    2    3   37   42
CONECT    3    4
CONECT    4    5   33   43
CONECT    5    6
CONECT    6    7   44   45
CONECT    7    8   31   46
CONECT    8    9
CONECT    9   10   27   47
CONECT   10   11
CONECT   11   12   12   26
CONECT   12   13   48
CONECT   13   14   15   15
CONECT   14   49
CONECT   15   16   50
CONECT   16   17   26   26
CONECT   17   18   18   51
CONECT   18   19   52
CONECT   19   20   20   25
CONECT   20   21   53
CONECT   21   22   22   54
CONECT   22   23   24
CONECT   23   55
CONECT   24   25   25   56
CONECT   25   57
CONECT   26   58
CONECT   27   28   29   59
CONECT   28   60
CONECT   29   30   31   61
CONECT   30   62
CONECT   31   32   63
CONECT   32   64
CONECT   33   34   35   65
CONECT   34   66
CONECT   35   36   37   67
CONECT   36   68
CONECT   37   38   69
CONECT   38   70
END

NP0001733
     RDKit          3D

70 73  0  0  0  0  0  0  0  0999 V2000
   -7.4290    1.9578    0.9933 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8126    0.5941    0.7969 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.8548    0.6784   -0.2120 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0893   -0.4950   -0.2784 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9007   -0.3834    0.4020 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8298   -0.4922   -0.4807 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4980   -0.3680    0.2775 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4658   -0.4777   -0.6222 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3638    0.6172   -0.6828 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3974    0.4958   -1.5991 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7494    0.5197   -1.4110 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5786    0.3722   -2.5301 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9452    0.3905   -2.3914 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7782    0.2478   -3.4754 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5012    0.5582   -1.1183 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7458    0.7044    0.0108 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2458    0.7837    1.3640 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2604    0.2436    1.9189 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1947   -0.6495    1.3104 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9981   -1.5503    0.3146 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0279   -2.2991   -0.2620 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3153   -2.1470    0.1740 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3748   -2.8797   -0.3792 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5473   -1.2431    1.1843 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5254   -0.5148    1.7392 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3577    0.6780   -0.2017 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5186    1.8208   -0.9528 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3093    2.9589   -1.0746 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4768    2.0850    0.1691 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7275    2.3940   -0.3757 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5744    0.8971    1.0599 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6094    0.9833    2.0887 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8806   -1.6837    0.1934 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.3554   -2.8245   -0.3718 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3407   -1.5916   -0.1854 C   0  0  2  0  0  0  0  0  0  0  0  0
   -7.4325   -1.5336   -1.5735 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9434   -0.3493    0.3880 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.7455   -0.5710    1.4926 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8877    2.5700    1.7391 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4706    1.8098    1.3487 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4799    2.4376   -0.0035 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3201    0.2421    1.7313 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8907   -0.6466   -1.3757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8725   -1.5032   -0.9565 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9339    0.2527   -1.2759 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5259   -1.2331    0.9929 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8175    0.7487    0.3173 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1448    0.2413   -3.5225 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4573    0.1231   -4.4207 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5830    0.6184   -1.0832 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6297    1.4393    2.0521 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4287    0.5041    3.0137 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0150   -1.7622   -0.0399 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8092   -2.9999   -1.0534 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2192   -3.5393   -1.1137 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.5675   -1.1301    1.5218 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7618    0.1771    2.5259 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7710    0.7979    0.7036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1066    1.6669   -1.8799 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4103    3.3636   -0.1663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1305    2.9905    0.7585 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0496    3.2788   -0.0926 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5550    0.9383    1.6418 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8698    0.3651    2.8271 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7873   -1.7254    1.2949 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9173   -3.6112   -0.1690 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8472   -2.4877    0.2213 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5625   -1.7325   -1.9867 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5150    0.2129   -0.3994 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6242   -0.8975    1.1496 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
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  9 27  1  0
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  4 33  1  0
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  4 43  1  6
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 37 69  1  6
 38 70  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₃₂O₁₂

Average Mass

536.5300 Da

Monoisotopic Mass

536.18938 Da

IUPAC Name

(2S,3R,4S,5S,6R)-2-{3-hydroxy-5-[(Z)-2-(4-hydroxyphenyl)ethenyl]phenoxy}-6-({[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}methyl)oxane-3,4,5-triol

Traditional Name

(2S,3R,4S,5S,6R)-2-{3-hydroxy-5-[(Z)-2-(4-hydroxyphenyl)ethenyl]phenoxy}-6-({[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}methyl)oxane-3,4,5-triol

CAS Registry Number

Not Available

SMILES

[H]OC1=C([H])C([H])=C(\C([H])=C(\[H])C2=C([H])C(O[H])=C([H])C(O[C@]3([H])O[C@]([H])(C([H])([H])O[C@]4([H])O[C@@]([H])(C([H])([H])[H])[C@]([H])(O[H])[C@@]([H])(O[H])[C@@]4([H])O[H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]3([H])O[H])=C2[H])C([H])=C1[H]

InChI Identifier

InChI=1S/C26H32O12/c1-12-19(29)21(31)23(33)25(36-12)35-11-18-20(30)22(32)24(34)26(38-18)37-17-9-14(8-16(28)10-17)3-2-13-4-6-15(27)7-5-13/h2-10,12,18-34H,11H2,1H3/b3-2-/t12-,18+,19-,20+,21+,22-,23+,24+,25+,26+/m0/s1

InChI Key

BBTZSNZPLSTSDA-CJOUEVQTSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 400Mz MHz, DMSO, experimental)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, Dimethylsulfoxide-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 400Mz, DMSO, simulated)	Rgf8b			2020-10-02	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
Lysidice brevicalyx	LOTUS Database	35616633
Lysidice brevicalyx Wei	KNApSAcK Database	22123792

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as stilbene glycosides. Stilbene glycosides are compounds structurally characterized by the presence of a carbohydrate moiety glycosidically linked to the stilbene skeleton.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Stilbenes

Sub Class

Stilbene glycosides

Direct Parent

Stilbene glycosides

Alternative Parents

Substituents

Stilbene glycoside
Phenolic glycoside
Disaccharide
Glycosyl compound
O-glycosyl compound
Phenoxy compound
Styrene
Phenol ether
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Phenol
Monocyclic benzene moiety
Benzenoid
Oxane
Secondary alcohol
Acetal
Organoheterocyclic compound
Oxacycle
Polyol
Organooxygen compound
Hydrocarbon derivative
Organic oxygen compound
Alcohol
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.11	ALOGPS
logP	0.41	ChemAxon
logS	-2.6	ALOGPS
pKa (Strongest Acidic)	9.1	ChemAxon
pKa (Strongest Basic)	-3.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	12	ChemAxon
Hydrogen Donor Count	8	ChemAxon
Polar Surface Area	198.76 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	130.47 m³·mol⁻¹	ChemAxon
Polarizability	53.46 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

24636829

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

25155598

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Lysidiside P (NP0001733)

MOL for NP0001733 (Lysidiside P)

3D MOL for NP0001733 (Lysidiside P)

3D SDF for NP0001733 (Lysidiside P)

3D-SDF for NP0001733 (Lysidiside P)

PDB for NP0001733 (Lysidiside P)

3D PDB for NP0001733 (Lysidiside P)

SMILES for NP0001733 (Lysidiside P)

INCHI for NP0001733 (Lysidiside P)

Structure for NP0001733 (Lysidiside P)

3D Structure for NP0001733 (Lysidiside P)